Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 TSPY22P-201ENST00000427496 604 ntBASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 IRF5-214ENST00000613821 595 ntTSL 5 BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 AC034236.2-201ENST00000606662 1610 ntBASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SH3TC1Q8TE82 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SH3TC1Q8TE82 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.33■■□□□ 1.32
SH3TC1Q8TE82 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SH3TC1Q8TE82 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SH3TC1Q8TE82 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SH3TC1Q8TE82 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SH3TC1Q8TE82 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SH3TC1Q8TE82 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.33■■□□□ 1.32
SH3TC1Q8TE82 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SH3TC1Q8TE82 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC23.33■■□□□ 1.32
SH3TC1Q8TE82 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.33■■□□□ 1.32
SH3TC1Q8TE82 VPS72-207ENST00000640458 689 ntTSL 5 BASIC23.33■■□□□ 1.32
SH3TC1Q8TE82 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SH3TC1Q8TE82 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 AC006333.2-201ENST00000607957 2099 ntBASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 AC093484.2-201ENST00000580996 2166 ntBASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.32■■□□□ 1.32
SH3TC1Q8TE82 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SH3TC1Q8TE82 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH3TC1Q8TE82 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SH3TC1Q8TE82 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH3TC1Q8TE82 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH3TC1Q8TE82 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
SH3TC1Q8TE82 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH3TC1Q8TE82 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SH3TC1Q8TE82 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SH3TC1Q8TE82 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms