Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40cQ8VHQ4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40cQ8VHQ4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40cQ8VHQ4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40cQ8VHQ4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40cQ8VHQ4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab40cQ8VHQ4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab40cQ8VHQ4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab40cQ8VHQ4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rab40cQ8VHQ4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rab40cQ8VHQ4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rab40cQ8VHQ4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab40cQ8VHQ4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab40cQ8VHQ4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab40cQ8VHQ4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab40cQ8VHQ4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rab40cQ8VHQ4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rab40cQ8VHQ4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rab40cQ8VHQ4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab40cQ8VHQ4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rab40cQ8VHQ4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.65■□□□□ 0.58
Rab40cQ8VHQ4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab40cQ8VHQ4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab40cQ8VHQ4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Rab40cQ8VHQ4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.65■□□□□ 0.58
Rab40cQ8VHQ4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab40cQ8VHQ4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rab40cQ8VHQ4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rab40cQ8VHQ4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rab40cQ8VHQ4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rab40cQ8VHQ4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab40cQ8VHQ4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab40cQ8VHQ4 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.64■□□□□ 0.57
Rab40cQ8VHQ4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rab40cQ8VHQ4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rab40cQ8VHQ4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rab40cQ8VHQ4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rab40cQ8VHQ4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rab40cQ8VHQ4 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.63■□□□□ 0.57
Rab40cQ8VHQ4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Rab40cQ8VHQ4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rab40cQ8VHQ4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rab40cQ8VHQ4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab40cQ8VHQ4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.61■□□□□ 0.57
Rab40cQ8VHQ4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Rab40cQ8VHQ4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.61■□□□□ 0.57
Rab40cQ8VHQ4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab40cQ8VHQ4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rab40cQ8VHQ4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab40cQ8VHQ4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rab40cQ8VHQ4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab40cQ8VHQ4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rab40cQ8VHQ4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab40cQ8VHQ4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rab40cQ8VHQ4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rab40cQ8VHQ4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.59■□□□□ 0.57
Rab40cQ8VHQ4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rab40cQ8VHQ4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rab40cQ8VHQ4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab40cQ8VHQ4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rab40cQ8VHQ4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rab40cQ8VHQ4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rab40cQ8VHQ4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.58■□□□□ 0.57
Rab40cQ8VHQ4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rab40cQ8VHQ4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rab40cQ8VHQ4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab40cQ8VHQ4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab40cQ8VHQ4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.57■□□□□ 0.56
Rab40cQ8VHQ4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Rab40cQ8VHQ4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Rab40cQ8VHQ4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rab40cQ8VHQ4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab40cQ8VHQ4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Rab40cQ8VHQ4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab40cQ8VHQ4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab40cQ8VHQ4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab40cQ8VHQ4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rab40cQ8VHQ4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rab40cQ8VHQ4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab40cQ8VHQ4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab40cQ8VHQ4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Rab40cQ8VHQ4 Gm30023-201ENSMUST00000197970 889 ntBASIC18.54■□□□□ 0.56
Rab40cQ8VHQ4 Zfp131-205ENSMUST00000223812 663 ntBASIC18.54■□□□□ 0.56
Rab40cQ8VHQ4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rab40cQ8VHQ4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.54■□□□□ 0.56
Rab40cQ8VHQ4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab40cQ8VHQ4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab40cQ8VHQ4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rab40cQ8VHQ4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab40cQ8VHQ4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.53■□□□□ 0.56
Rab40cQ8VHQ4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rab40cQ8VHQ4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rab40cQ8VHQ4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab40cQ8VHQ4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab40cQ8VHQ4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Rab40cQ8VHQ4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab40cQ8VHQ4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab40cQ8VHQ4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab40cQ8VHQ4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab40cQ8VHQ4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms