Protein–RNA interactions for Protein: D3YYI8

Gm10093, Histone deacetylase, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10093D3YYI8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Gm10093D3YYI8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
Gm10093D3YYI8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Gm10093D3YYI8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
Gm10093D3YYI8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Gm10093D3YYI8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Gm10093D3YYI8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC27.53■■■□□ 2
Gm10093D3YYI8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
Gm10093D3YYI8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Gm10093D3YYI8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC27.53■■■□□ 2
Gm10093D3YYI8 Gm17641-201ENSMUST00000166328 2350 ntBASIC27.53■■■□□ 2
Gm10093D3YYI8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Gm10093D3YYI8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
Gm10093D3YYI8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Gm10093D3YYI8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Gm10093D3YYI8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Gm10093D3YYI8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Gm10093D3YYI8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC27.52■■■□□ 2
Gm10093D3YYI8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Gm10093D3YYI8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Gm10093D3YYI8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Gm10093D3YYI8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.51■■□□□ 1.99
Gm10093D3YYI8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Gm10093D3YYI8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
Gm10093D3YYI8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC27.51■■□□□ 1.99
Gm10093D3YYI8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
Gm10093D3YYI8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Gm10093D3YYI8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Gm10093D3YYI8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Gm10093D3YYI8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Gm10093D3YYI8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Gm10093D3YYI8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Gm10093D3YYI8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC27.47■■□□□ 1.99
Gm10093D3YYI8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Gm10093D3YYI8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Gm10093D3YYI8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Gm10093D3YYI8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
Gm10093D3YYI8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Gm10093D3YYI8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
Gm10093D3YYI8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.46■■□□□ 1.99
Gm10093D3YYI8 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.46■■□□□ 1.99
Gm10093D3YYI8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Gm10093D3YYI8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
Gm10093D3YYI8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC27.45■■□□□ 1.99
Gm10093D3YYI8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Gm10093D3YYI8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Gm10093D3YYI8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Gm10093D3YYI8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
Gm10093D3YYI8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.45■■□□□ 1.98
Gm10093D3YYI8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
Gm10093D3YYI8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Gm10093D3YYI8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Gm10093D3YYI8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Gm10093D3YYI8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Gm10093D3YYI8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Gm10093D3YYI8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Gm10093D3YYI8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.41■■□□□ 1.98
Gm10093D3YYI8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC27.41■■□□□ 1.98
Gm10093D3YYI8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Gm10093D3YYI8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Gm10093D3YYI8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC27.39■■□□□ 1.98
Gm10093D3YYI8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Gm10093D3YYI8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Gm10093D3YYI8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Gm10093D3YYI8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
Gm10093D3YYI8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Gm10093D3YYI8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Gm10093D3YYI8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Gm10093D3YYI8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Gm10093D3YYI8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Gm10093D3YYI8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Gm10093D3YYI8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Gm10093D3YYI8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Gm10093D3YYI8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC27.35■■□□□ 1.97
Gm10093D3YYI8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
Gm10093D3YYI8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Gm10093D3YYI8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
Gm10093D3YYI8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Gm10093D3YYI8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Gm10093D3YYI8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Gm10093D3YYI8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Gm10093D3YYI8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Gm10093D3YYI8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Gm10093D3YYI8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
Gm10093D3YYI8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC27.32■■□□□ 1.96
Gm10093D3YYI8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Gm10093D3YYI8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Gm10093D3YYI8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Gm10093D3YYI8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Gm10093D3YYI8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.3■■□□□ 1.96
Gm10093D3YYI8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Gm10093D3YYI8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Gm10093D3YYI8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Gm10093D3YYI8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
Gm10093D3YYI8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Gm10093D3YYI8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Gm10093D3YYI8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.28■■□□□ 1.96
Gm10093D3YYI8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Gm10093D3YYI8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Gm10093D3YYI8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms