RNA–Protein interactions for RNA: ENST00000448443.6

YIPF5-202, Transcript of Yip1 domain family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF5, Length 2,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF5-202ENST00000448443 G3BP1Q13283 466 aaKnown RBP eCLIP13.8□□□□□ -0.21e-9■■■■■ 33.1
YIPF5-202ENST00000448443 RPS3P23396 243 aaKnown RBP eCLIP11.01□□□□□ -0.655e-9■■■■■ 32.9
YIPF5-202ENST00000448443 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.08□□□□□ -0.483e-6■■■■■ 28.8
YIPF5-202ENST00000448443 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12□□□□□ -0.494e-8■■■■□ 26
YIPF5-202ENST00000448443 UPF1Q92900 1129 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■■■■□ 25.6
YIPF5-202ENST00000448443 SF3B1O75533 1304 aaKnown RBP eCLIP11.83□□□□□ -0.522e-7■■■■□ 19.4
YIPF5-202ENST00000448443 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.19□□□□□ -0.628e-6■■■□□ 18.6
YIPF5-202ENST00000448443 QKIQ96PU8 341 aaKnown RBP eCLIP11.44□□□□□ -0.589e-6■■■□□ 18.3
YIPF5-202ENST00000448443 SND1Q7KZF4 910 aaKnown RBP eCLIP11.57□□□□□ -0.562e-6■■■□□ 17.5
YIPF5-202ENST00000448443 AQRO60306 1485 aaKnown RBP eCLIP18.33■□□□□ 0.522e-6■■■□□ 15.2
YIPF5-202ENST00000448443 U2AF2P26368 475 aaKnown RBP eCLIP12.83□□□□□ -0.355e-9■■□□□ 12.7
YIPF5-202ENST00000448443 DDX3XO00571 662 aaKnown RBP eCLIP11.91□□□□□ -0.59e-13■■□□□ 11.4
YIPF5-202ENST00000448443 PABPC4Q13310 644 aaKnown RBP eCLIP12.73□□□□□ -0.375e-6■□□□□ 10.8
Retrieved 13 of 13 RNA–protein pairs in 9.7 ms