RNA–Protein interactions for RNA: ENST00000407319.6

TRIOBP-205, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-205ENST00000407319 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.11■■■□□ 2.252e-6■■■■■ 96.1
TRIOBP-205ENST00000407319 SF3B1O75533 1304 aaKnown RBP eCLIP28.03■■■□□ 2.084e-7■■■■■ 86.2
TRIOBP-205ENST00000407319 EFTUD2Q15029 972 aaKnown RBP eCLIP28.3■■■□□ 2.121e-6■■■■□ 22.1
TRIOBP-205ENST00000407319 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.31■■□□□ 15e-7■■■□□ 18.7
TRIOBP-205ENST00000407319 PPIGQ13427 754 aaKnown RBP eCLIP27.85■■■□□ 2.053e-7■■■□□ 18.6
TRIOBP-205ENST00000407319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.45■■■■□ 3.752e-6■■■□□ 17.7
TRIOBP-205ENST00000407319 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.01■■■■□ 3.033e-6■■■□□ 15.8
TRIOBP-205ENST00000407319 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.74■■■□□ 2.191e-8■■□□□ 13
TRIOBP-205ENST00000407319 DDX3XO00571 662 aaKnown RBP eCLIP29.56■■■□□ 2.329e-11■■□□□ 12.7
TRIOBP-205ENST00000407319 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.47■■■□□ 2.152e-6■■□□□ 12.6
TRIOBP-205ENST00000407319 NKRFO15226 690 aaKnown RBP eCLIP30.14■■■□□ 2.425e-6■□□□□ 10.5
TRIOBP-205ENST00000407319 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.47■■■□□ 2.311e-6■□□□□ 8.7
Retrieved 12 of 12 RNA–protein pairs in 5 ms