RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 KIAA1614Q5VZ46 1190 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 OR2T5Q6IEZ7 315 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 CCBE1Q6UXH8 406 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-205ENST00000539661 GCNT7Q6ZNI0 430 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 VASH1Q7L8A9 365 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-205ENST00000539661 SCD5Q86SK9 330 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 C3orf58Q8NDZ4 430 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 OR4F6Q8NGB9 312 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 OR2T29Q8NH02 315 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 LINGO1Q96FE5 620 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 CEP295NLQ96MC4 621 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 PKMYT1Q99640 499 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 PITX2Q99697 317 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 CLMPQ9H6B4 373 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 ZBTB20Q9HC78 741 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-205ENST00000539661 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.22■□□□□ 0.35
RAB40C-205ENST00000539661 TLR6Q9Y2C9 796 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 MED26O95402 600 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 APOA1P02647 267 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 LCKP06239 509 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 DNAJA1P31689 397 aaKnown RBP17.22■□□□□ 0.35
RAB40C-205ENST00000539661 RPL9P32969 192 aaKnown RBP17.22■□□□□ 0.35
RAB40C-205ENST00000539661 KRT20P35900 424 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 TGFBR1P36897 503 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 ARL1P40616 181 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-205ENST00000539661 CTSKP43235 329 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 RPL38P63173 70 aaKnown RBP17.22■□□□□ 0.35
RAB40C-205ENST00000539661 ABRAXAS2Q15018 415 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 GOLGA7Q7Z5G4 137 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 METTL23Q86XA0 190 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 PARP16Q8N5Y8 322 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 FAM83FQ8NEG4 500 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-205ENST00000539661 KBTBD8Q8NFY9 601 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 PYCR2Q96C36 320 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 C6orf62Q9GZU0 229 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-205ENST00000539661 CCDC177Q9NQR7 707 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-205ENST00000539661 MKLN1Q9UL63 735 aa17.22■□□□□ 0.35
RAB40C-205ENST00000539661 IGLV3-10A0A075B6K4 115 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 TBKBP1A7MCY6 615 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 OR7A17O14581 309 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 CYP4B1P13584 511 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 FPR1P21462 350 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 PTGR1Q14914 329 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 CARD16Q5EG05 197 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 CACHD1Q5VU97 1274 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 ZNF544Q6NX49 715 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 TAS2R42Q7RTR8 314 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 HOMEZQ8IX15 550 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 IL17RDQ8NFM7 739 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 CD200R1Q8TD46 325 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 EEF1AKMT1Q8WVE0 214 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 SLC39A13Q96H72 371 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 CPPED1Q9BRF8 314 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-205ENST00000539661 RAPGEFL1Q9UHV5 662 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 ZNF221Q9UK13 617 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 RNF6Q9Y252 685 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 PEX16Q9Y5Y5 336 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 COMMD10Q9Y6G5 202 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 PNMA8CA0A1B0GUJ8 204 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 SLC28A1O00337 649 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 CA12O43570 354 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 SNAI1O95863 264 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-205ENST00000539661 ETV6P41212 452 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 GTF2H2Q13888 395 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 TBCEQ15813 527 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-205ENST00000539661 PARP15Q460N3 678 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 SPANXN4Q5MJ08 99 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 LRIF1Q5T3J3 769 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 GTF2H2CQ6P1K8 395 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 SIDT2Q8NBJ9 832 aaKnown RBP17.21■□□□□ 0.35
RAB40C-205ENST00000539661 RHNO1Q9BSD3 238 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 TMLHEQ9NVH6 421 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 DOCK3Q8IZD9 2030 aa17.21■□□□□ 0.35
RAB40C-205ENST00000539661 WNT9AO14904 365 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 PER2O15055 1255 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 MUSKO15146 869 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 SCO2O43819 266 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 CCNDBP1O95273 360 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 LIPAP38571 399 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 ABHD18Q0P651 414 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 SMN1Q16637 294 aaKnown RBP17.2■□□□□ 0.34
RAB40C-205ENST00000539661 TIGD5Q53EQ6 642 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 ALFQ53S48 1182 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 GDPD3Q7L5L3 318 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 KCNJ9Q92806 393 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 TRIB3Q96RU7 358 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 IL1RAPQ9NPH3 570 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 AASSQ9UDR5 926 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 PTPRDP23468 1912 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 A0A096LPI6 279 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 E9PQ18 207 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 TNFRSF10BO14763 440 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 F2P00734 622 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 PIRTP0C851 137 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 HOXA9P31269 272 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 TTPAP49638 278 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 CLCN4P51793 760 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 IL1RL1Q01638 556 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 ELP6Q0PNE2 266 aa17.2■□□□□ 0.34
RAB40C-205ENST00000539661 SERINC3Q13530 473 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms