RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 CHRM3P20309 590 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 CDH3P22223 829 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 ELK3P41970 407 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 BDKRB1P46663 353 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 UCNP55089 124 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 TUBB3Q13509 450 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 PLEKHS1Q5SXH7 462 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 CNSTQ6PJW8 725 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 UNC5DQ6UXZ4 953 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 UNC5AQ6ZN44 842 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 DCUN1D3Q8IWE4 304 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 LMNTD2Q8IXW0 634 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 ADGRF3Q8IZF5 1079 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 ZBTB2Q8N680 514 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 ZNF592Q92610 1267 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 SLC41A2Q96JW4 573 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 NAT9Q9BTE0 207 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 CCDC68Q9H2F9 335 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 PPANQ9NQ55 473 aaKnown RBP11.47□□□□□ -0.57
RAB5C-204ENST00000547517 ACTR10Q9NZ32 417 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 SEMA5BQ9P283 1151 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 SLC17A6Q9P2U8 582 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 ZC3H7BQ9UGR2 993 aaKnown RBP11.47□□□□□ -0.57
RAB5C-204ENST00000547517 FBXO5Q9UKT4 447 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 NFS1Q9Y697 457 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 SDK2Q58EX2 2172 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 PIPSLA2A3N6 862 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-204ENST00000547517 NDC80O14777 642 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 TP73O15350 636 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 KDM1AO60341 852 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 RAD1O60671 282 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 URI1O94763 535 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-204ENST00000547517 STK17BO94768 372 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 ZBTB11O95625 1053 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-204ENST00000547517 CHRM5P08912 532 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-204ENST00000547517 TPBGLP0DKB5 382 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 PVRP15151 417 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 FOLR1P15328 257 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 ZNF28P17035 718 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 PRDX3P30048 256 aaKnown RBP11.46□□□□□ -0.57
RAB5C-204ENST00000547517 PKLRP30613 574 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 ATP1A2P50993 1020 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 HSD11B2P80365 405 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 CKAP4Q07065 602 aaKnown RBP11.46□□□□□ -0.57
RAB5C-204ENST00000547517 PDIA2Q13087 525 aaKnown RBP11.46□□□□□ -0.57
RAB5C-204ENST00000547517 FASTKD3Q14CZ7 662 aaKnown RBP11.46□□□□□ -0.57
RAB5C-204ENST00000547517 MANEAQ5SRI9 462 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 ARHGAP40Q5TG30 622 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 MAATS1Q7Z4T9 603 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 TRIM73Q86UV7 250 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 TAX1BP1Q86VP1 789 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 DTX1Q86Y01 620 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 KMT5CQ86Y97 462 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 ANKMY2Q8IV38 441 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 RASGRP3Q8IV61 690 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 SPNS2Q8IVW8 549 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 BBOF1Q8ND07 529 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 CERS2Q96G23 380 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 IL17FQ96PD4 163 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 CCNL2Q96S94 520 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-204ENST00000547517 ZPBPQ9BS86 351 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 ULBP3Q9BZM4 244 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 KLHL25Q9H0H3 589 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 PRORYQ9H606 182 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 PLAC1Q9HBJ0 212 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 GALPQ9UBC7 116 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 TEX264Q9Y6I9 313 aa11.46□□□□□ -0.57
RAB5C-204ENST00000547517 ITPR1Q14643 2758 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 FASNP49327 2511 aaKnown RBP11.45□□□□□ -0.58
RAB5C-204ENST00000547517 TEX51A0A1B0GUA7 166 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 KRT87PA6NCN2 255 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 SLC9B1P1A6NJY1 282 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 HAUS5O94927 633 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 ST6GAL1P15907 406 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 UGT2B7P16662 529 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 ATP5DP30049 168 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 RAB28P51157 221 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 ACY1Q03154 408 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 CALCOCO2Q13137 446 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 CUL1Q13616 776 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 GBX1Q14549 363 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 IL11RAQ14626 422 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 GPR19Q15760 415 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 TTLL9Q3SXZ7 439 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 ACSBG2Q5FVE4 666 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 ZNF549Q6P9A3 640 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 CYB5D1Q6P9G0 228 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 TRMT10BQ6PF06 316 aaKnown RBP11.45□□□□□ -0.58
RAB5C-204ENST00000547517 SPESP1Q6UW49 350 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 CCDC81Q6ZN84 652 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 ZNF572Q7Z3I7 529 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-204ENST00000547517 PPP1R3BQ86XI6 285 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 CACNA2D3Q8IZS8 1091 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 CARFQ8N187 725 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 C2orf73Q8N5S3 287 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-204ENST00000547517 IL22RA1Q8N6P7 574 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 LMNTD1Q8N9Z9 388 aa11.45□□□□□ -0.58
RAB5C-204ENST00000547517 C2CD4AQ8NCU7 369 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-204ENST00000547517 FBXO36Q8NEA4 188 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms