RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 ASZ1Q8WWH4 475 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 LCN9Q8WX39 176 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 SEC14L1Q92503 715 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 GRAMD1AQ96CP6 724 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 C9orf72Q96LT7 481 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 SLC46A1Q96NT5 459 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 IL17FQ96PD4 163 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 GPR21Q99679 349 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 AARSD1Q9BTE6 412 aaKnown RBP11.32□□□□□ -0.6
UBA3-211ENST00000493957 EPB41L1Q9H4G0 881 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 MVB12BQ9H7P6 319 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 FOXJ2Q9P0K8 574 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 DKK4Q9UBT3 224 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 PCDHGA8Q9Y5G5 932 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 COLEC10Q9Y6Z7 277 aa11.32□□□□□ -0.6
UBA3-211ENST00000493957 DSPP15924 2871 aaKnown RBP11.31□□□□□ -0.6
UBA3-211ENST00000493957 IGHV5-51A0A0C4DH38 117 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 EFCAB7A8K855 629 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 CDRT15L2A8MXV6 281 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 CXorf49A8MYA2 514 aaPredicted RBP11.31□□□□□ -0.6
UBA3-211ENST00000493957 C9orf172C9J069 976 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 E5RI56 91 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 H3BMM5 538 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 TMX2-CTNND1H3BSU7 103 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 HGSO14964 777 aaPredicted RBP11.31□□□□□ -0.6
UBA3-211ENST00000493957 PFDN6O15212 129 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 PRAMEF10O60809 474 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 DXOO77932 396 aaKnown RBP11.31□□□□□ -0.6
UBA3-211ENST00000493957 JMJD7P0C870 316 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 NDUFS1P28331 727 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 SH3BP2P78314 561 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 MGAT5Q09328 741 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 TRA2AQ13595 282 aaKnown RBP eCLIP11.31□□□□□ -0.6
UBA3-211ENST00000493957 TUBB2AQ13885 445 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 FRG1Q14331 258 aaKnown RBP11.31□□□□□ -0.6
UBA3-211ENST00000493957 PLEKHS1Q5SXH7 462 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 PACS2Q86VP3 889 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 OOSP2Q86WS3 158 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 FAM129CQ86XR2 697 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 PLXDC1Q8IUK5 500 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 ADGRF3Q8IZF5 1079 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 BMPERQ8N8U9 685 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 MNS1Q8NEH6 495 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 OR5K2Q8NHB8 316 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 PYROXD1Q8WU10 500 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 SKA2Q8WVK7 121 aaPredicted RBP11.31□□□□□ -0.6
UBA3-211ENST00000493957 ZFPM2Q8WW38 1151 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 USP7Q93009 1102 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 MAP3K3Q99759 626 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 CMKLR1Q99788 373 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 CTRCQ99895 268 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 DPYSL5Q9BPU6 564 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 MENTQ9BUN1 341 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 TUBB2BQ9BVA1 445 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 KLHL25Q9H0H3 589 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 TRIT1Q9H3H1 467 aaKnown RBP11.31□□□□□ -0.6
UBA3-211ENST00000493957 SRMSQ9H3Y6 488 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 APMAPQ9HDC9 416 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 LATS2Q9NRM7 1088 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 HRASLS2Q9NWW9 162 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 SPHK1Q9NYA1 384 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 MOCS1Q9NZB8 636 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 SEC16AO15027 2179 aa11.31□□□□□ -0.6
UBA3-211ENST00000493957 GSAPA4D1B5 854 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 TMEM8BA6NDV4 472 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 SRRM3A6NNA2 597 aaPredicted RBP11.3□□□□□ -0.6
UBA3-211ENST00000493957 NDC80O14777 642 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 EIF3HO15372 352 aaKnown RBP eCLIP11.3□□□□□ -0.6
UBA3-211ENST00000493957 RASSF9O75901 435 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 C1QAP02745 245 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 PVRP15151 417 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 MCM3P25205 808 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 ECHS1P30084 290 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 PEBP1P30086 187 aaKnown RBP11.3□□□□□ -0.6
UBA3-211ENST00000493957 PKLRP30613 574 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 SLC5A2P31639 672 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 CSTF2P33240 577 aaKnown RBP eCLIP11.3□□□□□ -0.6
UBA3-211ENST00000493957 MAGEA4P43358 317 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 PLOD1Q02809 727 aaPredicted RBP11.3□□□□□ -0.6
UBA3-211ENST00000493957 CAV1Q03135 178 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 EIF3IQ13347 325 aaKnown RBP11.3□□□□□ -0.6
UBA3-211ENST00000493957 KCNAB1Q14722 419 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 EFTUD2Q15029 972 aaKnown RBP eCLIP11.3□□□□□ -0.61e-10■■■■■ 73.3
UBA3-211ENST00000493957 KLHL38Q2WGJ6 581 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.3□□□□□ -0.6
UBA3-211ENST00000493957 DNTTIP2Q5QJE6 756 aaKnown RBP11.3□□□□□ -0.6
UBA3-211ENST00000493957 CACHD1Q5VU97 1274 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 IGF2-ASQ6U949 168 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 PRSS42Q7Z5A4 293 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 TRIM73Q86UV7 250 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 AMIGO1Q86WK6 493 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 CPNE9Q8IYJ1 553 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 TBC1D21Q8IYX1 336 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 C2orf73Q8N5S3 287 aaPredicted RBP11.3□□□□□ -0.6
UBA3-211ENST00000493957 AGBL5Q8NDL9 886 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 FLVCR1-AS1Q8TAF5 88 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 NAF1Q96HR8 494 aaKnown RBP11.3□□□□□ -0.6
UBA3-211ENST00000493957 OLFM1Q99784 485 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 RAB33BQ9H082 229 aa11.3□□□□□ -0.6
UBA3-211ENST00000493957 CCDC68Q9H2F9 335 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms