RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 INSM2Q96T92 566 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 KIR3DX1Q9H7L2 352 aa17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 PIH1D1Q9NWS0 290 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 SLC24A2Q9UI40 661 aa17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 CRLS1Q9UJA2 301 aa17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 RIMKLBQ9ULI2 386 aa17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 FARSAQ9Y285 508 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 BLACEA4D250 179 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 MROH6A6NGR9 719 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 CFAP99D6REC4 459 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 H7C0S8 307 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 ZNF185O15231 689 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 VPS4BO75351 444 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 TPSB2P20231 275 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 PBLDP30039 288 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 AKT1P31749 480 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 MC4RP32245 332 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 PAFAH1B1P43034 410 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 NPY2RP49146 381 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 PGDP52209 483 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 GPS1Q13098 491 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 IL10RAQ13651 578 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 TPSAB1Q15661 275 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 BCL7AQ4VC05 210 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 FNBP1LQ5T0N5 605 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 TMTC4Q5T4D3 741 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 TTC27Q6P3X3 843 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 TMEM126BQ8IUX1 230 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 PPHLN1Q8NEY8 458 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 CDKN2AIPNLQ96HQ2 116 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 DNAJC1Q96KC8 554 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 LINC00615Q96LM1 132 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 C12orf66Q96MD2 445 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 RUNDC3BQ96NL0 473 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 WWP1Q9H0M0 922 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 SMARCAL1Q9NZC9 954 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 BFARQ9NZS9 450 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 VPS4AQ9UN37 437 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 BTRCQ9Y297 605 aa17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 CFAP20Q9Y6A4 193 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-203ENST00000594298 TTLL8A6PVC2 850 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 RAB40ALP0C0E4 278 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 GRIA1P42261 906 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 KPNA2P52292 529 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 GPS2Q13227 327 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 TRIP13Q15645 432 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 GPR19Q15760 415 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 ZRANB3Q5FWF4 1079 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 PCID2Q5JVF3 399 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 CPZQ66K79 652 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 CAPRIN2Q6IMN6 1127 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 ARMC6Q6NXE6 501 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 SLC38A9Q8NBW4 561 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 CPT1CQ8TCG5 803 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 ADAMTS17Q8TE56 1095 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 PEX13Q92968 403 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 TTC1Q99614 292 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 SLC25A23Q9BV35 468 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 IL22Q9GZX6 179 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 ING2Q9H160 280 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 ACSS2Q9NR19 701 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 COLEC10Q9Y6Z7 277 aa17.05■□□□□ 0.32
SHKBP1-203ENST00000594298 LRRK2Q5S007 2527 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 OR6C74A6NCV1 312 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 AGAP14A8MT82 685 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 CEACAM4O75871 244 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 KLK3P07288 261 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 SLC35G4P0C7Q5 338 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 PSMA3P25788 255 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 NDUFS1P28331 727 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 UQCRFS1P47985 274 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 VPS41P49754 854 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 CACNG1Q06432 222 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 PPP1R7Q15435 360 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 TSTD2Q5T7W7 516 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 DUS1LQ6P1R4 473 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 LRRC8BQ6P9F7 803 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 DET1Q7L5Y6 550 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 TAS2R42Q7RTR8 314 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 NXPE1Q8N323 547 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 EFCAB3Q8N7B9 438 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 SPDYE1Q8NFV5 336 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 MR1Q95460 341 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 CAPZA3Q96KX2 299 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 COPS8Q99627 209 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 SYTL2Q9HCH5 934 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 LRRC4CQ9HCJ2 640 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 MAP4K5Q9Y4K4 846 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 PCDHGB7Q9Y5F8 929 aa17.04■□□□□ 0.32
SHKBP1-203ENST00000594298 ARGFXA6NJG6 315 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 MEN1O00255 615 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 MATN2O00339 956 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 SGTAO43765 313 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 SORBS2O94875 1100 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 MSL3P1P0C860 447 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 CASQ1P31415 396 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 RORAP35398 523 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 MAGEA6P43360 314 aa17.03■□□□□ 0.32
SHKBP1-203ENST00000594298 SESN2P58004 480 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms