RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 CCL19Q99731 98 aa4.78□□□□□ -1.64
ERCC1-216ENST00000592444 DUSP16Q9BY84 665 aa4.78□□□□□ -1.64
ERCC1-216ENST00000592444 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
ERCC1-216ENST00000592444 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.78□□□□□ -1.64
ERCC1-216ENST00000592444 REG4Q9BYZ8 158 aa4.78□□□□□ -1.64
ERCC1-216ENST00000592444 ULBP1Q9BZM6 244 aa4.78□□□□□ -1.64
ERCC1-216ENST00000592444 STN1Q9H668 368 aaKnown RBP4.78□□□□□ -1.64
ERCC1-216ENST00000592444 ZFYVE1Q9HBF4 777 aa4.78□□□□□ -1.64
ERCC1-216ENST00000592444 SARS2Q9NP81 518 aaKnown RBP4.78□□□□□ -1.64
ERCC1-216ENST00000592444 FAM207AQ9NSI2 230 aaPredicted RBP4.78□□□□□ -1.64
ERCC1-216ENST00000592444 ZC3H7BQ9UGR2 993 aaKnown RBP4.78□□□□□ -1.64
ERCC1-216ENST00000592444 FRMD4BQ9Y2L6 1034 aa4.78□□□□□ -1.64
ERCC1-216ENST00000592444 COL7A1Q02388 2944 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 A0A087X0T9 212 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 IGHV5-51A0A0C4DH38 117 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 TCAF2A6NFQ2 919 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 YJEFN3A6XGL0 299 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 AKR1B15C9JRZ8 316 aaPredicted RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 DDX3XO00571 662 aaKnown RBP eCLIP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 RASGRF2O14827 1237 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 PJA2O43164 708 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 TCF21O43680 179 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 CLSTN1O94985 981 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 MLYCDO95822 493 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 HRGP04196 525 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 FAM228BP0C875 321 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 TMIGD3P0DMS9 266 aaPredicted RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 RAB6AP20340 208 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 TACR1P25103 407 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 TRIM23P36406 574 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 PEX19P40855 299 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 RPL34P49207 117 aaKnown RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 AP3M2P53677 418 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 GSCP56915 257 aaPredicted RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 NUP107P57740 925 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 POLR2FP61218 127 aaKnown RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 ACTG1P63261 375 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 TPM4P67936 248 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 FMO1Q01740 532 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 TAP2Q03519 686 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 TCEAL1Q15170 157 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 GPR19Q15760 415 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 SPRED3Q2MJR0 410 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 TMEM52BQ4KMG9 183 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 DCAF17Q5H9S7 520 aaPredicted RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 RAB41Q5JT25 222 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 WIPI1Q5MNZ9 446 aaPredicted RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 ZFYVE27Q5T4F4 411 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 OTUD1Q5VV17 481 aaPredicted RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 PM20D1Q6GTS8 502 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 ABHD17CQ6PCB6 329 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 NOP9Q86U38 636 aaKnown RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 SLC9B2Q86UD5 537 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 LIX1LQ8IVB5 337 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 MCATQ8IVS2 390 aaKnown RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 GALNT12Q8IXK2 581 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 GHDCQ8N2G8 530 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 C17orf53Q8N3J3 647 aaPredicted RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 RYBPQ8N488 228 aaPredicted RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 ARIH2OSQ8N7S6 290 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 OR8K1Q8NGG5 319 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 SLC22A8Q8TCC7 542 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 SLC20A1Q8WUM9 679 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 SLC41A2Q96JW4 573 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 FCRL2Q96LA5 508 aaPredicted RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 ZNF830Q96NB3 372 aaPredicted RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 PCDHB18PQ96TA0 734 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 TCF12Q99081 682 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 TRIM51Q9BSJ1 452 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 DHRS4Q9BTZ2 278 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 STK33Q9BYT3 514 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 NIF3L1Q9GZT8 377 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 ESRP2Q9H6T0 727 aaKnown RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 WDR26Q9H7D7 661 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 LIN7BQ9HAP6 207 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 ACP6Q9NPH0 428 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 RRAGDQ9NQL2 400 aaPredicted RBP4.77□□□□□ -1.65
ERCC1-216ENST00000592444 RAD18Q9NS91 495 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 ABCC13Q9NSE7 274 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 TMEM160Q9NX00 188 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 RAB20Q9NX57 234 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 FREM1Q5H8C1 2179 aa4.77□□□□□ -1.65
ERCC1-216ENST00000592444 LILRA5A6NI73 299 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 BTNL10A8MVZ5 291 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 EIF3CLB5ME19 914 aaKnown RBP4.76□□□□□ -1.65
ERCC1-216ENST00000592444 F5H5T6 163 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 FOXN3O00409 490 aaPredicted RBP4.76□□□□□ -1.65
ERCC1-216ENST00000592444 GFPT2O94808 682 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 UBXN7O94888 489 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 PRAMEF1O95521 474 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 JCHAINP01591 159 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 CYP1A1P04798 512 aaPredicted RBP4.76□□□□□ -1.65
ERCC1-216ENST00000592444 TPM3P06753 285 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 DLATP10515 647 aaKnown RBP4.76□□□□□ -1.65
ERCC1-216ENST00000592444 TRIM21P19474 475 aaKnown RBP4.76□□□□□ -1.65
ERCC1-216ENST00000592444 LIG3P49916 1009 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 ARSEP51690 589 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 RAD23BP54727 409 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 TUBB4BP68371 445 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 NOMO3P69849 1222 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 223.3 ms