RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 NAXDQ8IW45 347 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 PHACTR4Q8IZ21 702 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 LSMEM2Q8N112 164 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 DNAAF3Q8N9W5 541 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 C7orf57Q8NEG2 295 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 OR4K2Q8NGD2 314 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 PPP1R14CQ8TAE6 165 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 ZNF398Q8TD17 642 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 SETD7Q8WTS6 366 aaKnown RBP6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 STYXQ8WUJ0 223 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 OR1E3Q8WZA6 343 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 TRIM63Q969Q1 353 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 SCARF2Q96GP6 870 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 CAMK1GQ96NX5 476 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 VPS35Q96QK1 796 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 CCT7Q99832 543 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 TUBA1CQ9BQE3 449 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 SPATA16Q9BXB7 569 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 FRMD8Q9BZ67 464 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 CLPBQ9H078 707 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 DDX47Q9H0S4 455 aaKnown RBP6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 TCEAL2Q9H3H9 227 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 SLC32A1Q9H598 525 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 VPS37BQ9H9H4 285 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 FGF22Q9HCT0 170 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 MRPL40Q9NQ50 206 aaKnown RBP6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 BATF3Q9NR55 127 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 RASSF1Q9NS23 344 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 UCKL1Q9NWZ5 548 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 SPASTQ9UBP0 616 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 KLQ9UEF7 1012 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 PCOLCE2Q9UKZ9 415 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 TMPRSS11EQ9UL52 423 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 EDARQ9UNE0 448 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 SLC17A4Q9Y2C5 497 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 BTBD3Q9Y2F9 522 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 PKP3Q9Y446 797 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 KCTD3Q9Y597 815 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 DCHS1Q96JQ0 3298 aa6.18□□□□□ -1.42
ATPAF1-209ENST00000529214 A0A087WUV0 522 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 GLYATL1P3A0A0U1RQE8 302 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 PRSS38A1L453 326 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 AGAP14A8MT82 685 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 H7C0S8 307 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 AP3B1O00203 1094 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 GAPDHSO14556 408 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 TPP1O14773 563 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 INPP4BO15327 924 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 YY2O15391 372 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 PRODHO43272 600 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 AQP9O43315 295 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 ZBTB14O43829 449 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 UGT1A9O60656 530 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 TIPRLO75663 272 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 SLC25A14O95258 325 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 HTR3BO95264 441 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 KCNK5O95279 499 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 GAS8O95995 478 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 CTSEP14091 401 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 UGT1A6P19224 532 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 TPSB2P20231 275 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 UGT1A1P22309 533 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 UGT1A4P22310 534 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 ADRA1DP25100 572 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 IVDP26440 423 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 PRKAR1BP31321 381 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 UGT1A3P35503 534 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 UGT1A5P35504 534 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 SPAM1P38567 509 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 HADHAP40939 763 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 NPY2RP49146 381 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 VPS41P49754 854 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 XIAPP98170 497 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 C1orf61Q13536 156 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 PEX6Q13608 980 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 ITGA9Q13797 1035 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 KCNJ11Q14654 390 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 POU6F1Q14863 301 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 PCBP2Q15366 365 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 ELOCQ15369 112 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 TRIP6Q15654 476 aaKnown RBP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 TPSAB1Q15661 275 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 CHRNA6Q15825 494 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 SKIDA1Q1XH10 827 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 ATP13A5Q4VNC0 1218 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 PRRT3Q5FWE3 981 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 ALS2CLQ60I27 953 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 LRRC8BQ6P9F7 803 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 CHST15Q7LFX5 561 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 GLRX5Q86SX6 157 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 KLHL7Q8IXQ5 586 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 SLC15A3Q8IY34 581 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 RBFAQ8N0V3 343 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 FSTL5Q8N475 847 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 EID2Q8N6I1 236 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 NAXEQ8NCW5 288 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 ZNF548Q8NEK5 533 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 DEFB124Q8NES8 71 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 SPATA4Q8NEY3 305 aa6.17□□□□□ -1.42
ATPAF1-209ENST00000529214 OR13C4Q8NGS5 318 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms