RNA–Protein interactions for RNA: ENST00000509581.5

PDCD6-207, Transcript of programmed cell death 6, humanhuman

TSL 1 (best) BASIC

Gene PDCD6, Length 1,156 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-207ENST00000509581 COL27A1Q8IZC6 1860 aaPredicted RBP17.55■□□□□ 0.4
PDCD6-207ENST00000509581 PABPN1LA6NDY0 278 aaKnown RBP17.55■□□□□ 0.4
PDCD6-207ENST00000509581 CSO75390 466 aaKnown RBP17.55■□□□□ 0.4
PDCD6-207ENST00000509581 CATP04040 527 aaKnown RBP17.55■□□□□ 0.4
PDCD6-207ENST00000509581 TUBBP07437 444 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 F7P08709 466 aaPredicted RBP17.55■□□□□ 0.4
PDCD6-207ENST00000509581 FDXRP22570 491 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 CD1CP29017 333 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 SHMT2P34897 504 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 CAPZBP47756 277 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 INHBCP55103 352 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 POU4F1Q01851 419 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 TRA2AQ13595 282 aaKnown RBP eCLIP17.55■□□□□ 0.4
PDCD6-207ENST00000509581 RBM20Q5T481 1227 aaKnown RBP17.55■□□□□ 0.4
PDCD6-207ENST00000509581 TMEM71Q6P5X7 295 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 VRK3Q8IV63 474 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 MYO1HQ8N1T3 1032 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 PHC3Q8NDX5 983 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 OR4D9Q8NGE8 314 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 OR5AR1Q8NGP9 310 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 RAD51AP1Q96B01 352 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 ZDHHC12Q96GR4 267 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 FUT8Q9BYC5 575 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 SRMSQ9H3Y6 488 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 TFB2MQ9H5Q4 396 aaKnown RBP17.55■□□□□ 0.4
PDCD6-207ENST00000509581 POPDC3Q9HBV1 291 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 SYTL2Q9HCH5 934 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 SMYD2Q9NRG4 433 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 ANGPTL2Q9UKU9 493 aa17.55■□□□□ 0.4
PDCD6-207ENST00000509581 ATXN7L1Q9ULK2 861 aaPredicted RBP17.55■□□□□ 0.4
PDCD6-207ENST00000509581 TDRKHQ9Y2W6 561 aaKnown RBP17.55■□□□□ 0.4
PDCD6-207ENST00000509581 ANKRD12Q6UB98 2062 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 CXorf49A8MYA2 514 aaPredicted RBP17.54■□□□□ 0.4
PDCD6-207ENST00000509581 ABHD2P08910 425 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 TYRP1P17643 537 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 MAP4P27816 1152 aaKnown RBP17.54■□□□□ 0.4
PDCD6-207ENST00000509581 CCKBRP32239 447 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 ABCG1P45844 678 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 LIMK2P53671 638 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 IL2P60568 153 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 EIF3IQ13347 325 aaKnown RBP17.54■□□□□ 0.4
PDCD6-207ENST00000509581 ISXQ2M1V0 245 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 ACSBG2Q5FVE4 666 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 USP53Q70EK8 1073 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 CPNE9Q8IYJ1 553 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 OR52E1Q8NGJ3 308 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 SCNM1Q9BWG6 230 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 RAB33BQ9H082 229 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 ANKZF1Q9H8Y5 726 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 MED16Q9Y2X0 877 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 CACNA1AO00555 2505 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 PCM1Q15154 2024 aa17.54■□□□□ 0.4
PDCD6-207ENST00000509581 MATN4O95460 622 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 INHBAP08476 426 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 SAT1P21673 171 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 CDKN2DP55273 166 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 SHC2P98077 582 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 TARDBPQ13148 414 aaKnown RBP eCLIP17.53■□□□□ 0.4
PDCD6-207ENST00000509581 PRKG2Q13237 762 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 PHF19Q5T6S3 580 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 NKAIN2Q5VXU1 208 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 WDR93Q6P2C0 686 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 CCNI2Q6ZMN8 369 aaPredicted RBP17.53■□□□□ 0.4
PDCD6-207ENST00000509581 AMIGO1Q86WK6 493 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 NKAPQ8N5F7 415 aaKnown RBP17.53■□□□□ 0.4
PDCD6-207ENST00000509581 GIMAP7Q8NHV1 300 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 CD180Q99467 661 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 GPR22Q99680 433 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 CCDC77Q9BR77 488 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 NUDT22Q9BRQ3 303 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 RDH14Q9HBH5 336 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 GALPQ9UBC7 116 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 EPHA6Q9UF33 1036 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 SLC39A10Q9ULF5 831 aa17.53■□□□□ 0.4
PDCD6-207ENST00000509581 MN1Q10571 1320 aaPredicted RBP17.52■□□□□ 0.4
PDCD6-207ENST00000509581 PRAMEF33A0A0G2JMD5 474 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 OR5K3A6NET4 321 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 ZNF839A8K0R7 811 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 HGSO14964 777 aaPredicted RBP17.52■□□□□ 0.4
PDCD6-207ENST00000509581 TOX3O15405 576 aaPredicted RBP17.52■□□□□ 0.4
PDCD6-207ENST00000509581 ZBTB14O43829 449 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 C8GP07360 202 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 STMN1P16949 149 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 SERPINB9P50453 376 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 SP140Q13342 867 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 USP10Q14694 798 aaKnown RBP17.52■□□□□ 0.4
PDCD6-207ENST00000509581 UAP1Q16222 522 aaPredicted RBP17.52■□□□□ 0.4
PDCD6-207ENST00000509581 PAQR3Q6TCH7 311 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 OR4E2Q8NGC2 313 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 LIN37Q96GY3 246 aaPredicted RBP17.52■□□□□ 0.4
PDCD6-207ENST00000509581 CMKLR1Q99788 373 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 MCMBPQ9BTE3 642 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 HRASLS2Q9NWW9 162 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 OR6C2Q9NZP2 312 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 SPATA7Q9P0W8 599 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 LNPEPQ9UIQ6 1025 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 TSR3Q9UJK0 312 aaKnown RBP17.52■□□□□ 0.4
PDCD6-207ENST00000509581 MSRB2Q9Y3D2 182 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 ENTPD2Q9Y5L3 495 aa17.52■□□□□ 0.4
PDCD6-207ENST00000509581 DCHS1Q96JQ0 3298 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms