RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 CENPXA8MT69 81 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 TOMM70O94826 608 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 CNPP09543 421 aaKnown RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 ATP5F1P24539 256 aaPredicted RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 GRIA3P42263 894 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 PPP1R8Q12972 351 aaKnown RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 SERINC3Q13530 473 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 SEMA3AQ14563 771 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 PIWIL4Q7Z3Z4 852 aaKnown RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 SPRED2Q7Z698 418 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 PIANPQ8IYJ0 282 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 LILRA2Q8N149 483 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 FAM109AQ8N4B1 249 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 CYB5D2Q8WUJ1 264 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 SEPHS2Q99611 448 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 MIR1-1HGQ9H1L0 117 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 C1orf21Q9H246 121 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 WDR41Q9HAD4 459 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 SSU72Q9NP77 194 aaKnown RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 LSM7Q9UK45 103 aaKnown RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 RAP2CQ9Y3L5 183 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 PCDHB12Q9Y5F1 795 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 ARID1BQ8NFD5 2236 aaPredicted RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 FAM25EA8MYX2 175 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 STC2O76061 302 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 CLDN7O95471 211 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 HGFP14210 728 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 WASP42768 502 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 AIF1P55008 147 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 PAGE2BQ5JRK9 111 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 ZNF648Q5T619 568 aaPredicted RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 KCTD11Q693B1 232 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 METTL2BQ6P1Q9 378 aaKnown RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 MBOAT1Q6ZNC8 495 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 ARMC8Q8IUR7 673 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 KYQ8NBH2 561 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 ABHD11Q8NFV4 315 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 SDCCAG3Q96C92 435 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 TSPAN17Q96FV3 270 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 KIFC1Q9BW19 673 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 ABCB8Q9NUT2 735 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 TAS2R13Q9NYV9 303 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 FETUBQ9UGM5 382 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 EIF2B4Q9UI10 523 aaKnown RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 CLEC4EQ9ULY5 219 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 PCDHGA10Q9Y5H3 936 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 MAU2Q9Y6X3 613 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 ERVH48-1M5A8F1 160 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 SYN3O14994 580 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 AKAP10O43572 662 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 SERPINI2O75830 405 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 IPO13O94829 963 aaKnown RBP12.12□□□□□ -0.47
USP11-206ENST00000469080 TP53P04637 393 aaPredicted RBP12.12□□□□□ -0.47
USP11-206ENST00000469080 XRCC1P18887 633 aaPredicted RBP12.12□□□□□ -0.47
USP11-206ENST00000469080 PRDX3P30048 256 aaKnown RBP12.12□□□□□ -0.47
USP11-206ENST00000469080 RECQLP46063 649 aaPredicted RBP12.12□□□□□ -0.47
USP11-206ENST00000469080 FOXA1P55317 472 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 GPLD1P80108 840 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 DSC1Q08554 894 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 ELAVL2Q12926 359 aaKnown RBP12.12□□□□□ -0.47
USP11-206ENST00000469080 STEAP4Q687X5 459 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 ANGPTL8Q6UXH0 198 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 BBS7Q8IWZ6 715 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 DSELQ8IZU8 1212 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 C12orf76Q8N812 135 aaPredicted RBP12.12□□□□□ -0.47
USP11-206ENST00000469080 SLAIN1Q8ND83 568 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 PSMA8Q8TAA3 256 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 HM13Q8TCT9 377 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 SH3YL1Q96HL8 342 aaPredicted RBP12.12□□□□□ -0.47
USP11-206ENST00000469080 CLSTN3Q9BQT9 956 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 ATP13A2Q9NQ11 1180 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 ITM2CQ9NQX7 267 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 PLSCR3Q9NRY6 295 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 OLA1Q9NTK5 396 aaKnown RBP12.12□□□□□ -0.47
USP11-206ENST00000469080 ZNF840PA6NDX5 716 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 INPP4BO15327 924 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 ALAS2P22557 587 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 HAAOP46952 286 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 HCAR3P49019 387 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 ARHGDIAP52565 204 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 SLC18A1P54219 525 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 MSANTD2Q6P1R3 559 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 RFLNAQ6ZTI6 216 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 CILP2Q8IUL8 1156 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 POC5Q8NA72 575 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 MINDY2Q8NBR6 621 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 OR13J1Q8NGT2 312 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 EEF1AKMT1Q8WVE0 214 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 FUBP3Q96I24 572 aaKnown RBP eCLIP12.12□□□□□ -0.47
USP11-206ENST00000469080 IGSF21Q96ID5 467 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 BOCQ9BWV1 1114 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 PAQR5Q9NXK6 330 aaPredicted RBP12.12□□□□□ -0.47
USP11-206ENST00000469080 SLCO3A1Q9UIG8 710 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 CASP8AP2Q9UKL3 1982 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 EVPLLA8MZ36 301 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 ANGPT2O15123 496 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 ALDH1A2O94788 518 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 IFITM3Q01628 133 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 RAD51Q06609 339 aa12.12□□□□□ -0.47
USP11-206ENST00000469080 TBCCQ15814 346 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms