RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 CCM2Q9BSQ5 444 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 NUDT9Q9BW91 350 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 NLNQ9BYT8 704 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 GBA3Q9H227 469 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 CASS4Q9NQ75 786 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 LATS2Q9NRM7 1088 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 C1GALT1Q9NS00 363 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 POMT2Q9UKY4 750 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 BTRCQ9Y297 605 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 MAP4K5Q9Y4K4 846 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 HEBP2Q9Y5Z4 205 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 ALG6Q9Y672 507 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 USP9YO00507 2555 aaPredicted RBP11.14□□□□□ -0.63
RAB5C-203ENST00000546881 KLHL33A6NCF5 533 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 CFAP99D6REC4 459 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 MATN2O00339 956 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 IFRD1O00458 451 aaPredicted RBP11.14□□□□□ -0.63
RAB5C-203ENST00000546881 CCL22O00626 93 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 SEMA7AO75326 666 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 SORBS2O94875 1100 aaKnown RBP11.14□□□□□ -0.63
RAB5C-203ENST00000546881 RAB40ALP0C0E4 278 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 PYGMP11217 842 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 PVRP15151 417 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 ST6GAL1P15907 406 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 ITGALP20701 1170 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 PRDX3P30048 256 aaKnown RBP11.14□□□□□ -0.63
RAB5C-203ENST00000546881 OTX2P32243 289 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 ITGA1P56199 1179 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 MRPL49Q13405 166 aaKnown RBP11.14□□□□□ -0.63
RAB5C-203ENST00000546881 ATP1A4Q13733 1029 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 PRPSAP1Q14558 356 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 EIF2S3LQ2VIR3 472 aaKnown RBP11.14□□□□□ -0.63
RAB5C-203ENST00000546881 JMJD6Q6NYC1 403 aaPredicted RBP11.14□□□□□ -0.63
RAB5C-203ENST00000546881 ZNF517Q6ZMY9 492 aaPredicted RBP11.14□□□□□ -0.63
RAB5C-203ENST00000546881 HOOK3Q86VS8 718 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 LRRC8AQ8IWT6 810 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 KATNAL2Q8IYT4 538 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 RCOR2Q8IZ40 523 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 PHC3Q8NDX5 983 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 ADAMTS17Q8TE56 1095 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 N4BP2L2Q92802 583 aaPredicted RBP11.14□□□□□ -0.63
RAB5C-203ENST00000546881 ULK4Q96C45 1275 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 LRFN5Q96NI6 719 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 COPS8Q99627 209 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 NRTNQ99748 197 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 FERMT1Q9BQL6 677 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 TSGA10Q9BZW7 698 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 XKR8Q9H6D3 395 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 MLXIPLQ9NP71 852 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 PCMTD2Q9NV79 361 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 SERTAD3Q9UJW9 196 aa11.14□□□□□ -0.63
RAB5C-203ENST00000546881 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.14□□□□□ -0.63
RAB5C-203ENST00000546881 REXO2Q9Y3B8 237 aaKnown RBP11.14□□□□□ -0.63
RAB5C-203ENST00000546881 UTP20O75691 2785 aaKnown RBP11.14□□□□□ -0.63
RAB5C-203ENST00000546881 RCCD1A6NED2 376 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 C5orf60A6NFR6 353 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 TCP11X1B4DZS4 312 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 C9J4A7 227 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 E7EQ34 232 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 BTN3A3O00478 584 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 BTN3A1O00481 513 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 SGTAO43765 313 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 CRTAMO95727 393 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 ATP1B2P14415 290 aaPredicted RBP11.13□□□□□ -0.63
RAB5C-203ENST00000546881 AGXTP21549 392 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 CTNNA2P26232 953 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 PSMB4P28070 264 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 RORAP35398 523 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 PRLHRP49683 370 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 RRADP55042 308 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 XIAPP98170 497 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 PRKG2Q13237 762 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 NCF4Q15080 339 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 TCEAL1Q15170 157 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 PAPD7Q5XG87 772 aaKnown RBP11.13□□□□□ -0.63
RAB5C-203ENST00000546881 C11orf63Q6NUN7 778 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 ZNF449Q6P9G9 518 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 FAM198BQ6UWH4 519 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 MED25Q71SY5 747 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 RAB43Q86YS6 212 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 NXPE1Q8N323 547 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 ZBTB2Q8N680 514 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 OR52E1Q8NGJ3 308 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 PRR7Q8TB68 274 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 SGSM3Q96HU1 749 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 LINC00615Q96LM1 132 aaPredicted RBP11.13□□□□□ -0.63
RAB5C-203ENST00000546881 FAM118BQ9BPY3 351 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 GORASP1Q9BQQ3 440 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 HGH1Q9BTY7 390 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 SLC29A3Q9BZD2 475 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 COG4Q9H9E3 785 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 GPR83Q9NYM4 423 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 AAR2Q9Y312 384 aaKnown RBP11.13□□□□□ -0.63
RAB5C-203ENST00000546881 PCDHGB7Q9Y5F8 929 aa11.13□□□□□ -0.63
RAB5C-203ENST00000546881 USP9XQ93008 2570 aaPredicted RBP11.13□□□□□ -0.63
RAB5C-203ENST00000546881 BTNL10A8MVZ5 291 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 C2orf74A8MZ97 194 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 APOC4-APOC2K7ER74 178 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 KCNN4O15554 427 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 PJA2O43164 708 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms