RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 LRRC58Q96CX6 371 aa18■□□□□ 0.47
SDC2-202ENST00000518385 COG8Q96MW5 612 aa18■□□□□ 0.47
SDC2-202ENST00000518385 LYSMD1Q96S90 227 aa18■□□□□ 0.47
SDC2-202ENST00000518385 CPEB1Q9BZB8 566 aaKnown RBP18■□□□□ 0.47
SDC2-202ENST00000518385 DERL2Q9GZP9 239 aa18■□□□□ 0.47
SDC2-202ENST00000518385 GPN2Q9H9Y4 310 aaPredicted RBP18■□□□□ 0.47
SDC2-202ENST00000518385 POLR3BQ9NW08 1133 aaPredicted RBP18■□□□□ 0.47
SDC2-202ENST00000518385 CLEC1BQ9P126 229 aa18■□□□□ 0.47
SDC2-202ENST00000518385 SLC25A13Q9UJS0 675 aa18■□□□□ 0.47
SDC2-202ENST00000518385 PCDHA9Q9Y5H5 950 aa18■□□□□ 0.47
SDC2-202ENST00000518385 SAC3D1A6NKF1 404 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 AZIN1O14977 448 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 ACOX3O15254 700 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 SMAD6O43541 496 aaKnown RBP17.99■□□□□ 0.47
SDC2-202ENST00000518385 VPS26AO75436 327 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 KATNA1O75449 491 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 RHOBTB1O94844 696 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 TRBC1P01850 177 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 ESR1P03372 595 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 PKMP14618 531 aaKnown RBP17.99■□□□□ 0.47
SDC2-202ENST00000518385 POU3F3P20264 500 aaPredicted RBP17.99■□□□□ 0.47
SDC2-202ENST00000518385 PGGT1BP53609 377 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 TIAL1Q01085 375 aaKnown RBP eCLIP17.99■□□□□ 0.475e-7■■■□□ 15.8
SDC2-202ENST00000518385 RAD51Q06609 339 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 TOP3AQ13472 1001 aaPredicted RBP17.99■□□□□ 0.47
SDC2-202ENST00000518385 UNC50Q53HI1 259 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 UGT3A1Q6NUS8 523 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 NIPAL1Q6NVV3 410 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 TMEM207Q6UWW9 146 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 EPHX4Q8IUS5 362 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 SPATA6LQ8N4H0 392 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 TBC1D15Q8TC07 691 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 FGF13Q92913 245 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 IRF7Q92985 503 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 PLEKHA8Q96JA3 519 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 S1PR5Q9H228 398 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 LINC00597Q9H2U6 94 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 TTYH1Q9H313 450 aaPredicted RBP17.99■□□□□ 0.47
SDC2-202ENST00000518385 GDE1Q9NZC3 331 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 MARK1Q9P0L2 795 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 MAP10Q9P2G4 905 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 EBF1Q9UH73 591 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 EVLQ9UI08 416 aaPredicted RBP17.99■□□□□ 0.47
SDC2-202ENST00000518385 FKBPLQ9UIM3 349 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 INTS6Q9UL03 887 aaKnown RBP17.99■□□□□ 0.47
SDC2-202ENST00000518385 PPIL1Q9Y3C6 166 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 PCDHB1Q9Y5F3 818 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 MTCH2Q9Y6C9 303 aa17.99■□□□□ 0.47
SDC2-202ENST00000518385 OAS3Q9Y6K5 1087 aaKnown RBP17.99■□□□□ 0.47
SDC2-202ENST00000518385 A0A1B0GTW7 788 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 A0A1W2PP18 115 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 TTC36A6NLP5 189 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 K7ERQ8 282 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 PLOD2O00469 737 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 ARPC2O15144 300 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 SUPT7LO94864 414 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 SRCP12931 536 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 CCNA2P20248 432 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 SLC6A2P23975 617 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 GABARAPL2P60520 117 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 ADARB1P78563 741 aaKnown RBP17.98■□□□□ 0.47
SDC2-202ENST00000518385 KCNC4Q03721 635 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 GRIN2CQ14957 1233 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 RAB39AQ14964 217 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 FAM78AQ5JUQ0 283 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 ATAT1Q5SQI0 421 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 BROXQ5VW32 411 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 BLOC1S3Q6QNY0 202 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 GALNT13Q8IUC8 556 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 ADGRG2Q8IZP9 1017 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 STAG3L4Q8TBR4 150 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 KCNJ9Q92806 393 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 SMARCD2Q92925 531 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 BHMTQ93088 406 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 ASB16Q96NS5 453 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 TM6SF2Q9BZW4 377 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 AKTIPQ9H8T0 292 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 ZFYVE1Q9HBF4 777 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 LEF1Q9UJU2 399 aaPredicted RBP17.98■□□□□ 0.47
SDC2-202ENST00000518385 CLEC4EQ9ULY5 219 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 AURKCQ9UQB9 309 aa17.98■□□□□ 0.47
SDC2-202ENST00000518385 NUP210Q8TEM1 1887 aaPredicted RBP17.98■□□□□ 0.47
SDC2-202ENST00000518385 UBA6A0AVT1 1052 aaPredicted RBP17.97■□□□□ 0.47
SDC2-202ENST00000518385 TMEM221A6NGB7 291 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 NR5A2O00482 541 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 EEDO75530 441 aaKnown RBP17.97■□□□□ 0.47
SDC2-202ENST00000518385 ZNF821O75541 412 aaPredicted RBP17.97■□□□□ 0.47
SDC2-202ENST00000518385 POP4O95707 220 aaKnown RBP17.97■□□□□ 0.47
SDC2-202ENST00000518385 SLC4A1P02730 911 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 HLA-FP30511 346 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 VASPP50552 380 aaPredicted RBP17.97■□□□□ 0.47
SDC2-202ENST00000518385 RPS6KA2Q15349 733 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 CRY1Q16526 586 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 ZRANB3Q5FWF4 1079 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 TMEM25Q86YD3 366 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 DDIASQ8IXT1 998 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 OR13F1Q8NGS4 319 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 KIAA1191Q96A73 305 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 MOCOSQ96EN8 888 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 ZNF641Q96N77 438 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms