RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 RGS14O43566 566 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 JRKO75564 520 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 VNN2O95498 520 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 ANP32DO95626 131 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 BAG3O95817 575 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 ACADSP16219 412 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 PCK1P35558 622 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 CAMPP49913 170 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 METAP2P50579 478 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 NUDT6P53370 316 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 ELF3P78545 371 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 KIF5AQ12840 1032 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 STK4Q13043 487 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 CUL1Q13616 776 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 SPA17Q15506 151 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 KBTBD12Q3ZCT8 623 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 ODF2Q5BJF6 829 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 PPP6R3Q5H9R7 873 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCDC122Q5T0U0 273 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 GGNBP1Q5YKI7 109 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 PMS2CLQ68D20 193 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 SIGIRRQ6IA17 410 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 KIAA0930Q6ICG6 404 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCNI2Q6ZMN8 369 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 DPPA4Q7L190 304 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 GALNT5Q7Z7M9 940 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 UNC5CLQ8IV45 518 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 AFAP1Q8N556 730 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 LINC00301Q8NCQ3 95 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 ELMOD3Q96FG2 381 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 STAMBPL1Q96FJ0 436 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCDC43Q96MW1 224 aaKnown RBP4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 LRFN5Q96NI6 719 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 GBP5Q96PP8 586 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 OR2A14Q96R47 310 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 SMC6Q96SB8 1091 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 PCGF1Q9BSM1 259 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 MXD3Q9BW11 206 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 C1QTNF1Q9BXJ1 281 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 C1QTNF7Q9BXJ2 289 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 SLC29A3Q9BZD2 475 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 SIL1Q9H173 461 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 PLK3Q9H4B4 646 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 TXLNGQ9NUQ3 528 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 SETD4Q9NVD3 440 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 UTP6Q9NYH9 597 aaKnown RBP4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 TSPYL4Q9UJ04 414 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 RPS6KA6Q9UK32 745 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 FZD10Q9ULW2 581 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 RPL26L1Q9UNX3 145 aaKnown RBP4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 BCL9LQ86UU0 1499 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 WNK3Q9BYP7 1800 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 PLCH1Q4KWH8 1693 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 RREB1Q92766 1687 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 EVPLQ92817 2033 aa4.4□□□□□ -1.7
HMGB1P16-201ENST00000447155 OR6C75A6NL08 312 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 B4DGG1 531 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 H3BNX3 289 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 J3KR12 359 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 TIMM23O14925 209 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 BIRC5O15392 142 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 HSPA12AO43301 675 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 TRAPPC3O43617 180 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 JAK2O60674 1132 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ATP5HO75947 161 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 BEST1O76090 585 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 BMP15O95972 392 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 CYC1P08574 325 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 CLTAP09496 248 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 HMOX1P09601 288 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 TROVE2P10155 538 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ACTN1P12814 892 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 AKR1B1P15121 316 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF18P17022 549 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ATP6V1C1P21283 382 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ATP5DP30049 168 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 HOXD3P31249 432 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 HOXC9P31274 260 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 HPDP32754 393 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 RPL3P39023 403 aaKnown RBP4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 AMTP48728 403 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 COMPP49747 757 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF81P51508 661 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 CCNG1P51959 295 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 TAS2R40P59535 323 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 MRPS34P82930 218 aaKnown RBP4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 IKQ13123 557 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ITGB3BPQ13352 177 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 LEXMQ3ZCV2 418 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 USH1GQ495M9 461 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 CFAP221Q4G0U5 840 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 TTMPQ5BVD1 217 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 SPDYCQ5MJ68 293 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ANKRD20A2Q5SQ80 823 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ANKRD20A1Q5TYW2 823 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ANKRD20A3Q5VUR7 823 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF425Q6IV72 752 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 IRGCQ6NXR0 463 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 C6orf89Q6UWU4 347 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 RAD9BQ6WBX8 426 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms