RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 GREB1LQ9C091 1923 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 SCN10AQ9Y5Y9 1956 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 TANC1Q9C0D5 1861 aa4.71□□□□□ -1.66
HMGB3P5-201ENST00000428894 PTPRSQ13332 1948 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 GAGE10A6NGK3 116 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 VGLL3A8MV65 326 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 EIF3FO00303 357 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 IPO8O15397 1037 aaKnown RBP4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 MBTPS2O43462 519 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 SURF6O75683 361 aaKnown RBP4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 CXCL10P02778 98 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 TFP02787 698 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 RB1P06400 928 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 CFC1BP0CG36 223 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 CFC1P0CG37 223 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 METAP2P50579 478 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 CNTN2Q02246 1040 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 SIGLEC14Q08ET2 396 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 GPM6BQ13491 265 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 PTGISQ16647 500 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 EPC2Q52LR7 807 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 CCDC184Q52MB2 194 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 C12orf60Q5U649 245 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 TXNDC8Q6A555 127 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 C19orf48Q6RUI8 117 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 LCTLQ6UWM7 567 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 KLHDC8BQ8IXV7 354 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 ZNF444Q8N0Y2 327 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 METTL27Q8N6F8 245 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 OTUD6BQ8N6M0 293 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 OR6J1Q8NGC5 347 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 DUSP19Q8WTR2 217 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 SDR42E1Q8WUS8 393 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 ABTB1Q969K4 478 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 WBP2Q969T9 261 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 DYNLL2Q96FJ2 89 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 YY1AP1Q9H869 796 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 PLEKHA5Q9HAU0 1116 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 TMEM30AQ9NV96 361 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 PADI1Q9ULC6 663 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 GAB2Q9UQC2 676 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 MYO7AQ13402 2215 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 VPS13AQ96RL7 3174 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 MICAL3Q7RTP6 2002 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 BAZ2AQ9UIF9 1905 aaKnown RBP4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 MYH4Q9Y623 1939 aa4.7□□□□□ -1.66
HMGB3P5-201ENST00000428894 NLRC5Q86WI3 1866 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 TEX13CA0A0J9YWL9 993 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 GOLGA6L9A6NEM1 432 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 CAPN9O14815 690 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 NDUFB10O96000 172 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 IRF1P10914 325 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 MAOAP21397 527 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 S1PR1P21453 382 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 RRM1P23921 792 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 STAT2P52630 851 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 HNRNPH2P55795 449 aaKnown RBP4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 UFM1P61960 85 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 DEFB103AP81534 67 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 RNPS1Q15287 305 aaKnown RBP4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 TCEAL5Q5H9L2 206 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 GPATCH4Q5T3I0 446 aaKnown RBP4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 PLA2G4FQ68DD2 849 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 KCTD18Q6PI47 426 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 RRM2BQ7LG56 351 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 RPAINQ86UA6 219 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 KMT5CQ86Y97 462 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 FBXO16Q8IX29 292 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 RNF113BQ8IZP6 322 aaKnown RBP4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 SPATA6LQ8N4H0 392 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 HUS1BQ8NHY5 278 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 MORC4Q8TE76 937 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 WBP1Q96G27 269 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 DUX3Q96PT4 197 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 PPCSQ9HAB8 311 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 RBM28Q9NW13 759 aaKnown RBP4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 TMEM160Q9NX00 188 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 TAAR2Q9P1P5 351 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 CLIP2Q9UDT6 1046 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 DBNLQ9UJU6 430 aaKnown RBP4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 PNMA2Q9UL42 364 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 TTC7AQ9ULT0 858 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 AMDHD2Q9Y303 409 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 ZNF532Q9HCE3 1301 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 RALGAPA2Q2PPJ7 1873 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 KMT2EQ8IZD2 1858 aa4.69□□□□□ -1.66
HMGB3P5-201ENST00000428894 MYO10Q9HD67 2058 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 FAM72CH0Y354 149 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 IFNL4K9M1U5 179 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 PEX14O75381 377 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 COX7A2P14406 83 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 ITGA2P17301 1181 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 DDX5P17844 614 aaKnown RBP4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 CASTP20810 708 aaKnown RBP4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 GNL1P36915 607 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 USP8P40818 1118 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 NBL1P41271 181 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 SORDQ00796 357 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms