RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 OR5K4A6NMS3 321 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 KIR2DS3K7RE56 304 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 AGRPO00253 132 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 PIAS1O75925 651 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 TTC4O95801 387 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 MT-CO3P00414 261 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 VIPP01282 170 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 FTH1P02794 183 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 RHOXF2BP0C7M4 288 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 SLC2A4P14672 509 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 RPS3P23396 243 aaKnown RBP eCLIP12.55□□□□□ -0.4
VEGFA-224ENST00000523873 SSTR1P30872 391 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 HALP42357 657 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 MAPK9P45984 424 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 FASLGP48023 281 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 E2F1Q01094 437 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 KIR2DS5Q14953 304 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 RPE65Q16518 533 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 CNSTQ6PJW8 725 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 WASH2PQ6VEQ5 465 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 ZNF438Q7Z4V0 828 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 VRK3Q8IV63 474 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 IFT81Q8WYA0 676 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 SEC14L1Q92503 715 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 LRRC39Q96DD0 335 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 CXorf40BQ96DE9 158 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 C9orf72Q96LT7 481 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 C12orf66Q96MD2 445 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 BIRC8Q96P09 236 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 SLC38A3Q99624 504 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 RHOXF2Q9BQY4 288 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 FAM167BQ9BTA0 163 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 NAT9Q9BTE0 207 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 SCNM1Q9BWG6 230 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 ABCG4Q9H172 646 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 OR52A5Q9H2C5 316 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 VPS37BQ9H9H4 285 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 L2HGDHQ9H9P8 463 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 SARS2Q9NP81 518 aaKnown RBP12.55□□□□□ -0.4
VEGFA-224ENST00000523873 WASH6PQ9NQA3 447 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 KCNK4Q9NYG8 393 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 GALPQ9UBC7 116 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 GNPTGQ9UJJ9 305 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 TSR3Q9UJK0 312 aaKnown RBP12.55□□□□□ -0.4
VEGFA-224ENST00000523873 FBXO5Q9UKT4 447 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 WASF3Q9UPY6 502 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 PCM1Q15154 2024 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 C17orf113A0A1B0GUU1 675 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 SLC5A10A0PJK1 596 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 QSOX1O00391 747 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 HAUS5O94927 633 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 SLC35G4P0C7Q5 338 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 MTHFD1P11586 935 aaKnown RBP12.54□□□□□ -0.4
VEGFA-224ENST00000523873 PNLIPP16233 465 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 XRCC1P18887 633 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-224ENST00000523873 GABRB3P28472 473 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 PPM1FP49593 454 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-224ENST00000523873 CAV1Q03135 178 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 NR1D2Q14995 579 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 SYTL3Q4VX76 610 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 UBAP2Q5T6F2 1119 aaKnown RBP12.54□□□□□ -0.4
VEGFA-224ENST00000523873 RNF187Q5TA31 235 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-224ENST00000523873 CDCP2Q5VXM1 449 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 CAPRIN2Q6IMN6 1127 aaKnown RBP12.54□□□□□ -0.4
VEGFA-224ENST00000523873 ZNF549Q6P9A3 640 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 USP53Q70EK8 1073 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 TMPRSS7Q7RTY8 843 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 TMPRSS9Q7Z410 1059 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 C2CD4AQ8NCU7 369 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-224ENST00000523873 PHC3Q8NDX5 983 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 OR6C4Q8NGE1 309 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 GSDMBQ8TAX9 411 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 CALML6Q8TD86 181 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 PYROXD1Q8WU10 500 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 TCF12Q99081 682 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 NRTNQ99748 197 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 STN1Q9H668 368 aaKnown RBP12.54□□□□□ -0.4
VEGFA-224ENST00000523873 RDH14Q9HBH5 336 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 SMYD2Q9NRG4 433 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 FAM114A2Q9NRY5 505 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 POT1Q9NUX5 634 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 ACSL5Q9ULC5 683 aa12.54□□□□□ -0.4
VEGFA-224ENST00000523873 SPEGQ15772 3267 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 NTN3O00634 580 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-224ENST00000523873 EIF3HO15372 352 aaKnown RBP eCLIP12.53□□□□□ -0.42e-6■□□□□ 9
VEGFA-224ENST00000523873 CSO75390 466 aaKnown RBP12.53□□□□□ -0.4
VEGFA-224ENST00000523873 PKMP14618 531 aaKnown RBP12.53□□□□□ -0.4
VEGFA-224ENST00000523873 JUPP14923 745 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 MPSTP25325 297 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 AOAHP28039 575 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 ECHS1P30084 290 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 CSF2RBP32927 897 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 PDX1P52945 283 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 GPX6P59796 221 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 CFHR1Q03591 330 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 HSPA14Q0VDF9 509 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 TARDBPQ13148 414 aaKnown RBP eCLIP12.53□□□□□ -0.43e-6■■■■□ 20.1
VEGFA-224ENST00000523873 CBLBQ13191 982 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 SPIDRQ14159 915 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 GPR18Q14330 331 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms