RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 NUSAP1Q9BXS6 441 aaKnown RBP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 ACTR5Q9H9F9 607 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 PAPOLBQ9NRJ5 636 aaKnown RBP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 SLC6A13Q9NSD5 602 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 ASIC5Q9NY37 505 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 OGFRQ9NZT2 677 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 RASAL2Q9UJF2 1139 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 CCL27Q9Y4X3 112 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 BOD1L1Q8NFC6 3051 aa4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 KIF26AQ9ULI4 1882 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P23-201ENST00000518743 ABCA7Q8IZY2 2146 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 SPENQ96T58 3664 aaKnown RBP4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 HIVEP1P15822 2718 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 LCTP09848 1927 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 ARID1BQ8NFD5 2236 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 A0A1W2PQF6 199 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 DPPA5A6NC42 116 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 A8MV72 311 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 ATP2A1O14983 1001 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 INPPL1O15357 1258 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 GJB3O75712 270 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 NFATC1O95644 943 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 ABCB1P08183 1280 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 MYBL1P10243 752 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 HLA-EP13747 358 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 ZNF182P17025 639 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 GABRB1P18505 474 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 MAKP20794 623 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 ADORA1P30542 326 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 TMPOP42166 694 aaKnown RBP4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 CENPAP49450 140 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 HSF1Q00613 529 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 ACSM2AQ08AH3 577 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 CCDC173Q0VFZ6 552 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 SLC14A1Q13336 389 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 RUNX2Q13950 521 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 HNRNPDQ14103 355 aaKnown RBP4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 DRAP1Q14919 205 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 NAB2Q15742 525 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 ARL13AQ5H913 290 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 C6orf141Q5SZD1 244 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 ACSM2BQ68CK6 577 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 RBM44Q6ZP01 1051 aaKnown RBP4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 GALNTL5Q7Z4T8 443 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 SLFN11Q7Z7L1 901 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 PIP4P1Q86T03 277 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 GALNT13Q8IUC8 556 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 ZDHHC23Q8IYP9 409 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 MMP21Q8N119 569 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 FAM3CQ92520 227 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 SLC22A18Q96BI1 424 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 PDLIM2Q96JY6 352 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 BBS4Q96RK4 519 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 KIFC3Q9BVG8 833 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 C1QTNF3Q9BXJ4 246 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 BICC1Q9H694 974 aaKnown RBP4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 CYP39A1Q9NYL5 469 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 SPG21Q9NZD8 308 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 FBXL17Q9UF56 701 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 EXO1Q9UQ84 846 aaKnown RBP4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 HIVEP3Q5T1R4 2406 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 CRYBG3Q68DQ2 2970 aa4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 NIPBLQ6KC79 2804 aaeCLIP4.76□□□□□ -1.65
HMGB1P23-201ENST00000518743 PDS5AQ29RF7 1337 aaKnown RBP4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 PDZD2O15018 2839 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 EML5Q05BV3 1969 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 hCG_1809904A0A1W2PP81 198 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 A0A1W2PPE2 198 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 A0A1W2PR64 198 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 TCRBV7S3A2A0A539 114 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 FAM149AA5PLN7 773 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 LRRC72A6NJI9 287 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 A8MXE2 369 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 FAM157AC9JC47 383 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 SEC14L5O43304 696 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 ADAM20O43506 726 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 GPC4O75487 556 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 SEC31AO94979 1220 aaKnown RBP4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 TPOP07202 933 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 CCDC175P0C221 793 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 EEF2P13639 858 aaKnown RBP4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 CD52P31358 61 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 PTPN9P43378 593 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 SOX2P48431 317 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 CAMPP49913 170 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 HDAC4P56524 1084 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 DYNLL1P63167 89 aaKnown RBP4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 MTA1Q13330 715 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 LPIN1Q14693 890 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 PCLAFQ15004 111 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 ODF2Q5BJF6 829 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 ALG10Q5BKT4 473 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 ALG10BQ5I7T1 473 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 BEND3Q5T5X7 828 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 ERMARDQ5T6L9 678 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 KRT79Q5XKE5 535 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 ISM2Q6H9L7 571 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 MOB3CQ70IA8 216 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms