RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CD84Q9UIB8 345 aa14.95□□□□□ -0.02
SCAMP4-202ENST00000409472 PCDHB1Q9Y5F3 818 aa14.95□□□□□ -0.02
SCAMP4-202ENST00000409472 COMMD10Q9Y6G5 202 aa14.95□□□□□ -0.02
SCAMP4-202ENST00000409472 XIRP2A4UGR9 3374 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 MLYCDO95822 493 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 VCLP18206 1134 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 SERPINA4P29622 427 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 B4GALNT1Q00973 533 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 TLR1Q15399 786 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 PAGE3Q5JUK9 113 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 MPP7Q5T2T1 576 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 BLOC1S3Q6QNY0 202 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 CERS6Q6ZMG9 384 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 TICAM1Q8IUC6 712 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 SORCS1Q8WY21 1168 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 LRGUKQ96M69 825 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 ZNF382Q96SR6 550 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 C11orf49Q9H6J7 331 aa14.94□□□□□ -0.02
SCAMP4-202ENST00000409472 ZNF839A8K0R7 811 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 ANGPT2O15123 496 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 MATN4O95460 622 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 C8BP07358 591 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 PIM1P11309 404 aaPredicted RBP14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 RPS3P23396 243 aaKnown RBP eCLIP14.93□□□□□ -0.029e-7■□□□□ 11.2
SCAMP4-202ENST00000409472 SPAM1P38567 509 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 PLOD1Q02809 727 aaPredicted RBP14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 TRAF3Q13114 568 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 ATP13A5Q4VNC0 1218 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 TIGD2Q4W5G0 525 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 RABL3Q5HYI8 236 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 OGFOD2Q6N063 350 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 ZFP1Q6P2D0 407 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 HACD2Q6Y1H2 254 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 ALDH16A1Q8IZ83 802 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 NXPE1Q8N323 547 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 SFRP1Q8N474 314 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 LRTOMTQ8WZ04 291 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 NUSAP1Q9BXS6 441 aaKnown RBP14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 EGFL7Q9UHF1 273 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 GNPTGQ9UJJ9 305 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 USP22Q9UPT9 525 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 TPD52L2O43399 206 aaKnown RBP14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 ADH1AP07327 375 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 SLC6A2P23975 617 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 CSNK1DP48730 415 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 RPL26P61254 145 aaKnown RBP14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 CDKL1Q00532 357 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 PTSQ03393 145 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 FOLH1Q04609 750 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 GTF2H2Q13888 395 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 RPS6KA2Q15349 733 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 MYLK3Q32MK0 819 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 C6orf136Q5SQH8 315 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 GPRC6AQ5T6X5 926 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 TMEM215Q68D42 235 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 GTF2H2CQ6P1K8 395 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 ADAMTSL2Q86TH1 951 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 SLC15A3Q8IY34 581 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 ZBTB2Q8N680 514 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 ECHDC3Q96DC8 303 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 PDLIM5Q96HC4 596 aaKnown RBP14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 MTG2Q9H4K7 406 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 ZMYM5Q9UJ78 669 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 TMPRSS11EQ9UL52 423 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 HS3ST2Q9Y278 367 aa14.93□□□□□ -0.02
SCAMP4-202ENST00000409472 PEX1O43933 1283 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 C1SP09871 688 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 MED21Q13503 144 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 RCAN2Q14206 197 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 ABRAXAS2Q15018 415 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 SAMD4BQ5PRF9 694 aaKnown RBP14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 DUS1LQ6P1R4 473 aaKnown RBP14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 IL27RAQ6UWB1 636 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 GALNT4Q8N4A0 578 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 FNDC5Q8NAU1 212 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 ACTL8Q9H568 366 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 FARSBQ9NSD9 589 aaKnown RBP14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 MRGBPQ9NV56 204 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 ABCD2Q9UBJ2 740 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 NDUFAF1Q9Y375 327 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 TMED5Q9Y3A6 229 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 TRANK1O15050 2925 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 BBIP1A8MTZ0 92 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 FFAR3O14843 346 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 GPR42O15529 346 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 MTX2O75431 263 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 GLUD1P00367 558 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 CASP2P42575 452 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 GRM2Q14416 872 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 PCBP2Q15366 365 aaKnown RBP eCLIP14.92□□□□□ -0.023e-8■■■□□ 17.4
SCAMP4-202ENST00000409472 ADRM1Q16186 407 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 RARS2Q5T160 578 aaKnown RBP14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 HMBOX1Q6NT76 420 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 DET1Q7L5Y6 550 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 MYO1HQ8N1T3 1032 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 PDPRQ8NCN5 879 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 ICA1LQ8NDH6 482 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 DNAJB14Q8TBM8 379 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 METTL6Q8TCB7 284 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms