RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 ARFGAP3Q9NP61 516 aa10.7□□□□□ -0.7
PTP4A1-207ENST00000639568 IFT80Q9P2H3 777 aaPredicted RBP10.7□□□□□ -0.7
PTP4A1-207ENST00000639568 TNFRSF10DQ9UBN6 386 aa10.7□□□□□ -0.7
PTP4A1-207ENST00000639568 FBXL4Q9UKA2 621 aa10.7□□□□□ -0.7
PTP4A1-207ENST00000639568 ZGRF1Q86YA3 2104 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 TRAV17A0A0B4J275 112 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 FADS2P1A8MWK0 482 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 FOXO6A8MYZ6 492 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 ZNF749O43361 778 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 CLDN7O95471 211 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 F13A1P00488 732 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 PNMA6AP0CW24 399 aaPredicted RBP10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 KRT3P12035 628 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 ADSLP30566 484 aaPredicted RBP10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 AIF1P55008 147 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 CEBPEQ15744 281 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 C3AR1Q16581 482 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 EXOC3L4Q17RC7 722 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 RALGPS1Q5JS13 557 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 ZNF648Q5T619 568 aaPredicted RBP10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 NAA35Q5VZE5 725 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 KLHL10Q6JEL2 608 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 PRIMA1Q86XR5 153 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 CREBRFQ8IUR6 639 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 RAVER1Q8IY67 606 aaKnown RBP10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 GPR135Q8IZ08 494 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 ADAMTS18Q8TE60 1221 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 PIH1D2Q8WWB5 315 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 NRGNQ92686 78 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 N4BP2L2Q92802 583 aaPredicted RBP10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 NACC2Q96BF6 587 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 MAGED4Q96JG8 741 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 LMF1Q96S06 567 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 ZNF559Q9BR84 538 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 TRIM56Q9BRZ2 755 aaKnown RBP10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 TIMM29Q9BSF4 260 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 SLC6A20Q9NP91 592 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 TINAGQ9UJW2 476 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 DNAJC12Q9UKB3 198 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 FZD10Q9ULW2 581 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 FHOD1Q9Y613 1164 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 ADGRG1Q9Y653 693 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 CSPG4Q6UVK1 2322 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 FER1L5A0AVI2 2057 aa10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 MDC1Q14676 2089 aaKnown RBP10.69□□□□□ -0.7
PTP4A1-207ENST00000639568 NSD1Q96L73 2696 aaPredicted RBP10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 FLNAP21333 2647 aaKnown RBP10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 PRRC2AP48634 2157 aaKnown RBP10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 A0A0J9YYE9 177 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 FAM237AA0A1B0GTK4 181 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 BICDL2A1A5D9 508 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 OR6C74A6NCV1 312 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 ATMINO43313 823 aaPredicted RBP10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 ALOX12BO75342 701 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 RASAL1O95294 804 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 TRBC1P01850 177 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 PDHA1P08559 390 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 CDH3P22223 829 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 IL4RP24394 825 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 PPP1R2P41236 205 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 MEOX1P50221 254 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 MAXP61244 160 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 DCDP81605 110 aaKnown RBP10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 MFAP5Q13361 173 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 ZNF569Q5MCW4 686 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 HENMT1Q5T8I9 393 aaKnown RBP10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 C1orf189Q5VU69 101 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 CES4AQ5XG92 561 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 TMEM198Q66K66 360 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 FBXO38Q6PIJ6 1188 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 CLEC9AQ6UXN8 241 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 FAM71AQ8IYT1 594 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 DNAJB8Q8NHS0 232 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 CCHCR1Q8TD31 782 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 NSMCE1Q8WV22 266 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 THOC3Q96J01 351 aaKnown RBP10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 SMIM14Q96QK8 99 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 TREX2Q9BQ50 279 aaPredicted RBP10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 TMEM121Q9BTD3 319 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 SPATA16Q9BXB7 569 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 PKD2L2Q9NZM6 624 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 ABI3Q9P2A4 366 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 CDC23Q9UJX2 597 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 EDARQ9UNE0 448 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 WDR37Q9Y2I8 494 aa10.68□□□□□ -0.7
PTP4A1-207ENST00000639568 PIKFYVEQ9Y2I7 2098 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 ANKRD62A6NC57 917 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 K7ELQ4 463 aaPredicted RBP10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 EEF2KO00418 725 aaKnown RBP10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 CHUKO15111 745 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 PMPCBO75439 489 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 ZWINTO95229 277 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 DESP17661 470 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 GPD1P21695 349 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 MST1P26927 711 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 SPINT3P49223 89 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 KPNA2P52292 529 aaKnown RBP10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 PRKAA1Q13131 559 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 SLC9A5Q14940 896 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 PCOLCEQ15113 449 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms