RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TPK1Q9H3S4 243 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 SMOC2Q9H3U7 446 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 EPS8L2Q9H6S3 715 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 OSGIN1Q9UJX0 560 aa17.53■□□□□ 0.4
NUP54-205ENST00000507257 PIN4Q9Y237 131 aaKnown RBP17.53■□□□□ 0.4
NUP54-205ENST00000507257 PATJQ8NI35 1801 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 OTOFQ9HC10 1997 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 TOR1BO14657 336 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 ANKRD28O15084 1053 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 ECI2O75521 394 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 RPP40O75818 363 aaKnown RBP17.52■□□□□ 0.4
NUP54-205ENST00000507257 UPK1BO75841 260 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 GOT2P00505 430 aaKnown RBP17.52■□□□□ 0.4
NUP54-205ENST00000507257 RETP07949 1114 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 PCNAP12004 261 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 CD86P42081 329 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 SELPLGQ14242 412 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 ZNF181Q2M3W8 571 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 DCP2Q8IU60 420 aaKnown RBP17.52■□□□□ 0.4
NUP54-205ENST00000507257 SULF1Q8IWU6 871 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 SVOPQ8N4V2 548 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 FNDC5Q8NAU1 212 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 OR2T12Q8NG77 320 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 GLMNQ92990 594 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 FAM49AQ9H0Q0 323 aaPredicted RBP17.52■□□□□ 0.4
NUP54-205ENST00000507257 GABARAPL1Q9H0R8 117 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 ACTR8Q9H981 624 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 SPC25Q9HBM1 224 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 TMEFF2Q9UIK5 374 aaPredicted RBP17.52■□□□□ 0.4
NUP54-205ENST00000507257 ORC6Q9Y5N6 252 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 A3GALT2U3KPV4 340 aa17.52■□□□□ 0.4
NUP54-205ENST00000507257 PTGESO14684 152 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 GSNP06396 782 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 CD6P30203 668 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 DCTP40126 519 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 ST13P50502 369 aaKnown RBP17.51■□□□□ 0.39
NUP54-205ENST00000507257 STC1P52823 247 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 MTPNP58546 118 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 RAD51Q06609 339 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 KEAP1Q14145 624 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 NKG7Q16617 165 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 GPRIN3Q6ZVF9 776 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 DSG4Q86SJ6 1040 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 PNPLA1Q8N8W4 532 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 MCOLN3Q8TDD5 553 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 FUBP1Q96AE4 644 aaKnown RBP17.51■□□□□ 0.39
NUP54-205ENST00000507257 C1orf74Q96LT6 269 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 PPM1MQ96MI6 270 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 HOXD1Q9GZZ0 328 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 DSN1Q9H410 356 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 EHD1Q9H4M9 534 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 PIF1Q9H611 641 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 NOL6Q9H6R4 1146 aaKnown RBP17.51■□□□□ 0.39
NUP54-205ENST00000507257 CCNB1IP1Q9NPC3 277 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 PIM2Q9P1W9 311 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 GINS2Q9Y248 185 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 TESMINQ9Y4I5 508 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 IPPQ9Y573 584 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 PCDHGA10Q9Y5H3 936 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 OR51F1A6NGY5 319 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 CLDN24A6NM45 220 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 E9PAM4 449 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 NFKBIEO00221 500 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 BCKDKO14874 412 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 AXIN1O15169 862 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 ANGPTL1O95841 491 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 EPOP01588 193 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 CD9P21926 228 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 PCSK1P29120 753 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 SOX11P35716 441 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 NRIP1P48552 1158 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 ALDH7A1P49419 539 aaKnown RBP17.51■□□□□ 0.39
NUP54-205ENST00000507257 TUBA1BP68363 451 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 YWHAHQ04917 246 aaPredicted RBP17.51■□□□□ 0.39
NUP54-205ENST00000507257 MARC1Q5VT66 337 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 AGMOQ6ZNB7 445 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 Q6ZSR9 355 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 TUBA1AQ71U36 451 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 AKAP14Q86UN6 197 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 FAM126BQ8IXS8 530 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 NKAPQ8N5F7 415 aaKnown RBP17.51■□□□□ 0.39
NUP54-205ENST00000507257 ARL10Q8N8L6 244 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 RHBDF1Q96CC6 855 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 SH3GL1Q99961 368 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 ACTL8Q9H568 366 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 NT5MQ9NPB1 228 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 ABCC13Q9NSE7 274 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 CATSPERZQ9NTU4 200 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 TAS2R13Q9NYV9 303 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 ADGRE2Q9UHX3 823 aa17.51■□□□□ 0.39
NUP54-205ENST00000507257 ANKRD12Q6UB98 2062 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 PTGES3LE9PB15 166 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 FZD9O00144 591 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 GNGT2O14610 69 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 CXCL11O14625 94 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 NOBOXO60393 691 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 SEC24AO95486 1093 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 FGF1P05230 155 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 HLA-DPA1P20036 260 aa17.5■□□□□ 0.39
NUP54-205ENST00000507257 PRDX3P30048 256 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms