RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 UNC5BQ8IZJ1 945 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 GALNT15Q8N3T1 639 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 GPR150Q8NGU9 434 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 JPH3Q8WXH2 748 aaPredicted RBP11.43□□□□□ -0.58
UBA3-211ENST00000493957 PEX13Q92968 403 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 RMDN2Q96LZ7 410 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 FOXP3Q9BZS1 431 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 WWP1Q9H0M0 922 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 ABCG4Q9H172 646 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 LRRN3Q9H3W5 708 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 SNX24Q9Y343 169 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 CFAP20Q9Y6A4 193 aaKnown RBP11.43□□□□□ -0.58
UBA3-211ENST00000493957 PCM1Q15154 2024 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 ZCWPW2A0A1B0GU75 182 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 MGAT4DA6NG13 374 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 SDR42E2A6NKP2 422 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 IQCF5A8MTL0 148 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 D6RAR5 112 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 CFAP99D6REC4 459 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 AP3B1O00203 1094 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 CD3EAPO15446 510 aaKnown RBP11.42□□□□□ -0.58
UBA3-211ENST00000493957 SEC31AO94979 1220 aaKnown RBP11.42□□□□□ -0.58
UBA3-211ENST00000493957 POLBP06746 335 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 RALBP11234 206 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 CDK4P11802 303 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 IDSP22304 550 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 FASLGP48023 281 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 PREPP48147 710 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 ARCN1P48444 511 aaKnown RBP11.42□□□□□ -0.58
UBA3-211ENST00000493957 DHX34Q14147 1143 aaKnown RBP11.42□□□□□ -0.58
UBA3-211ENST00000493957 SPIDRQ14159 915 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 ITIH4Q14624 930 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 ISXQ2M1V0 245 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 FASTKD1Q53R41 847 aaKnown RBP11.42□□□□□ -0.58
UBA3-211ENST00000493957 AGAP9Q5VTM2 703 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 METRNLQ641Q3 311 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 KIAA0930Q6ICG6 404 aaPredicted RBP11.42□□□□□ -0.58
UBA3-211ENST00000493957 HIBCHQ6NVY1 386 aaPredicted RBP11.42□□□□□ -0.58
UBA3-211ENST00000493957 ABRAXAS1Q6UWZ7 409 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 PACS1Q6VY07 963 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 USP53Q70EK8 1073 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 ZNF572Q7Z3I7 529 aaPredicted RBP11.42□□□□□ -0.58
UBA3-211ENST00000493957 OR6C4Q8NGE1 309 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 OR2L2Q8NH16 312 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 TRIM44Q96DX7 344 aaPredicted RBP11.42□□□□□ -0.58
UBA3-211ENST00000493957 ATXN7L3BQ96GX2 97 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 SGSM3Q96HU1 749 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 ZNF514Q96K75 400 aaPredicted RBP11.42□□□□□ -0.58
UBA3-211ENST00000493957 LINC00615Q96LM1 132 aaPredicted RBP11.42□□□□□ -0.58
UBA3-211ENST00000493957 RUNDC3BQ96NL0 473 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 CNTNAP3BQ96NU0 1288 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 GFM1Q96RP9 751 aaKnown RBP11.42□□□□□ -0.58
UBA3-211ENST00000493957 NUDT22Q9BRQ3 303 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 TBC1D10AQ9BXI6 508 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 CNTNAP3Q9BZ76 1288 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 DPH5Q9H2P9 285 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 RDH14Q9HBH5 336 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 PLAC1Q9HBJ0 212 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 TMEM9Q9P0T7 183 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 SAMD15Q9P1V8 674 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 CPNE7Q9UBL6 633 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 CDC23Q9UJX2 597 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 ENTPD2Q9Y5L3 495 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 MAD1L1Q9Y6D9 718 aa11.42□□□□□ -0.58
UBA3-211ENST00000493957 DNMT3AQ9Y6K1 912 aaPredicted RBP11.42□□□□□ -0.58
UBA3-211ENST00000493957 USP24Q9UPU5 2620 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 SPTBP11277 2137 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 IGHV1OR21-1A0A087WYE8 117 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 KIR2DS5A0A0G2JLQ3 304 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 A0A0G2JNG1 304 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 FAM237BA0A1B0GVD1 139 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 TRABD2BA6NFA1 517 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 EFCAB8A8MWE9 144 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 KIR2DS3K7RE56 304 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 PNLIPP16233 465 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 VCLP18206 1134 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 CD1CP29017 333 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 PDHA2P29803 388 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 NSG1P42857 185 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 MAPK9P45984 424 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 BIRC2Q13490 618 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 KIR2DS5Q14953 304 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 BRD3Q15059 726 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 TRADDQ15628 312 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 RPE65Q16518 533 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 BBS9Q3SYG4 887 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 ZNF789Q5FWF6 425 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 UNQ6494/PRO21346Q6UXR6 183 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 WASH2PQ6VEQ5 465 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 ZNF574Q6ZN55 896 aaPredicted RBP11.41□□□□□ -0.58
UBA3-211ENST00000493957 RBM44Q6ZP01 1051 aaKnown RBP11.41□□□□□ -0.58
UBA3-211ENST00000493957 TMEM135Q86UB9 458 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 SLC9B2Q86UD5 537 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 HOOK3Q86VS8 718 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 CFAP206Q8IYR0 622 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 KRT222Q8N1A0 295 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 OTUD6BQ8N6M0 293 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.41□□□□□ -0.58
UBA3-211ENST00000493957 STAMBPL1Q96FJ0 436 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 SNF8Q96H20 258 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms