RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 DCAF12L1Q5VU92 463 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 H3BQ06 376 aaPredicted RBP17.14■□□□□ 0.33
PTPN21-208ENST00000556564 GRIA3P42263 894 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 CLCNKAP51800 687 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 MRPS22P82650 360 aaKnown RBP17.14■□□□□ 0.33
PTPN21-208ENST00000556564 WDR45BQ5MNZ6 344 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 IZUMO2Q6UXV1 221 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 SLC9A6Q92581 669 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 PIWIL1Q96J94 861 aaKnown RBP17.14■□□□□ 0.33
PTPN21-208ENST00000556564 CASD1Q96PB1 797 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 CCM2Q9BSQ5 444 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 CORO1CQ9ULV4 474 aaPredicted RBP17.14■□□□□ 0.33
PTPN21-208ENST00000556564 NRAPQ86VF7 1730 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 RB1P06400 928 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 RPL4P36578 427 aaKnown RBP17.13■□□□□ 0.33
PTPN21-208ENST00000556564 EPHX4Q8IUS5 362 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 R3HDMLQ9H3Y0 253 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 ZNF840PA6NDX5 716 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 PSMA3P25788 255 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 CCNFP41002 786 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 HK2P52789 917 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 PSME3P61289 254 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 GAL3ST4Q96RP7 486 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 TCF12Q99081 682 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 SLC2A6Q9UGQ3 507 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 RPS6KA6Q9UK32 745 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 RGSL1A5PLK6 1076 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 GABRDO14764 452 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 ANXA4P09525 319 aaPredicted RBP17.13■□□□□ 0.33
PTPN21-208ENST00000556564 ATP1B2P14415 290 aaPredicted RBP17.13■□□□□ 0.33
PTPN21-208ENST00000556564 ITGAXP20702 1163 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 IRF9Q00978 393 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 MTAPQ13126 283 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 TRMT10BQ6PF06 316 aaKnown RBP17.13■□□□□ 0.33
PTPN21-208ENST00000556564 GK5Q6ZS86 529 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 REXO5Q96IC2 774 aaKnown RBP17.13■□□□□ 0.33
PTPN21-208ENST00000556564 MRTO4Q9UKD2 239 aaKnown RBP17.13■□□□□ 0.33
PTPN21-208ENST00000556564 MKL2Q9ULH7 1088 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 KCNK6Q9Y257 313 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 OR4F21O95013 312 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 PLA2G16P53816 162 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 RPL6Q02878 288 aaKnown RBP17.13■□□□□ 0.33
PTPN21-208ENST00000556564 RCN3Q96D15 328 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 NPAS2Q99743 824 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 OSBPL10Q9BXB5 764 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 ZNF229Q9UJW7 825 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 BACE2Q9Y5Z0 518 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 ARCN1P48444 511 aaKnown RBP17.13■□□□□ 0.33
PTPN21-208ENST00000556564 STXBP1P61764 594 aaKnown RBP17.13■□□□□ 0.33
PTPN21-208ENST00000556564 SLC13A2Q13183 592 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 MRPL10Q7Z7H8 261 aaKnown RBP17.13■□□□□ 0.33
PTPN21-208ENST00000556564 TTC9BQ8N6N2 239 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 DPYSL5Q9BPU6 564 aa17.13■□□□□ 0.33
PTPN21-208ENST00000556564 LRRC14BA6NHZ5 514 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 GRXCR1A8MXD5 290 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 PRAMEF11O60813 436 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 CNOT3O75175 753 aaKnown RBP17.12■□□□□ 0.33
PTPN21-208ENST00000556564 LEFTY1O75610 366 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 BDKRB1P46663 353 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 KIAA0930Q6ICG6 404 aaPredicted RBP17.12■□□□□ 0.33
PTPN21-208ENST00000556564 KIAA0408Q6ZU52 694 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 CENPTQ96BT3 561 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 SPAG4Q9NPE6 437 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 SUCOQ9UBS9 1254 aaKnown RBP17.12■□□□□ 0.33
PTPN21-208ENST00000556564 TK2O00142 265 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 STATHP02808 62 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 SERINC3Q13530 473 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 ADGRD1Q6QNK2 874 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 SPATA19Q7Z5L4 167 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 ADAMTS15Q8TE58 950 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 PCBD2Q9H0N5 130 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 ANKRD66B4E2M5 251 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 DEAF1O75398 565 aaPredicted RBP17.12■□□□□ 0.33
PTPN21-208ENST00000556564 DLDP09622 509 aaKnown RBP17.12■□□□□ 0.33
PTPN21-208ENST00000556564 PGDP52209 483 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 ASTE1Q2TB18 679 aaPredicted RBP17.12■□□□□ 0.33
PTPN21-208ENST00000556564 TIGD2Q4W5G0 525 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 KHDRBS2Q5VWX1 349 aaKnown RBP17.12■□□□□ 0.33
PTPN21-208ENST00000556564 DCLRE1BQ9H816 532 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 DDX18Q9NVP1 670 aaKnown RBP17.12■□□□□ 0.33
PTPN21-208ENST00000556564 PLAGL1Q9UM63 463 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 SLC6A2P23975 617 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 MYCBPQ99417 103 aaPredicted RBP17.12■□□□□ 0.33
PTPN21-208ENST00000556564 CD248Q9HCU0 757 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 MYH7P12883 1935 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 KAT6AQ92794 2004 aa17.12■□□□□ 0.33
PTPN21-208ENST00000556564 A0A1W2PP55 124 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 H3BNH8 94 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 AP3D1O14617 1153 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 B3GALT2O43825 422 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 RECQL5O94762 991 aaPredicted RBP17.11■□□□□ 0.33
PTPN21-208ENST00000556564 PAFAH1B3Q15102 231 aaKnown RBP17.11■□□□□ 0.33
PTPN21-208ENST00000556564 LRRC26Q2I0M4 334 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 DRICH1Q6PGQ1 229 aaPredicted RBP17.11■□□□□ 0.33
PTPN21-208ENST00000556564 GKN2Q86XP6 184 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 SRFBP1Q8NEF9 429 aaKnown RBP17.11■□□□□ 0.33
PTPN21-208ENST00000556564 SORCS1Q8WY21 1168 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 PMEPA1Q969W9 287 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 PRICKLE1Q96MT3 831 aaPredicted RBP17.11■□□□□ 0.33
PTPN21-208ENST00000556564 SAR1AQ9NR31 198 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms