RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 PRRG1O14668 218 aa14.6□□□□□ -0.07
DDX55-209ENST00000542286 ANGPT2O15123 496 aa14.6□□□□□ -0.07
DDX55-209ENST00000542286 SERPINB7O75635 380 aa14.6□□□□□ -0.07
DDX55-209ENST00000542286 ZNF26P17031 533 aaPredicted RBP14.6□□□□□ -0.07
DDX55-209ENST00000542286 NUP107P57740 925 aa14.6□□□□□ -0.07
DDX55-209ENST00000542286 ARMC12Q5T9G4 340 aa14.6□□□□□ -0.07
DDX55-209ENST00000542286 SLC15A3Q8IY34 581 aa14.6□□□□□ -0.07
DDX55-209ENST00000542286 TTC30BQ8N4P2 665 aa14.6□□□□□ -0.07
DDX55-209ENST00000542286 VPS50Q96JG6 964 aa14.6□□□□□ -0.07
DDX55-209ENST00000542286 ZNF599Q96NL3 588 aa14.6□□□□□ -0.07
DDX55-209ENST00000542286 CORO1BQ9BR76 489 aa14.6□□□□□ -0.07
DDX55-209ENST00000542286 GPR63Q9BZJ6 419 aa14.6□□□□□ -0.07
DDX55-209ENST00000542286 DERL2Q9GZP9 239 aa14.6□□□□□ -0.07
DDX55-209ENST00000542286 ZFC3H1O60293 1989 aaKnown RBP14.6□□□□□ -0.07
DDX55-209ENST00000542286 REV3LO60673 3130 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 AKAP10O43572 662 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 FOXD2O60548 495 aaPredicted RBP14.59□□□□□ -0.07
DDX55-209ENST00000542286 IL12AP29459 219 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 GALNT1Q10472 559 aaPredicted RBP14.59□□□□□ -0.07
DDX55-209ENST00000542286 NOGQ13253 232 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 C5orf22Q49AR2 442 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 PDCD4Q53EL6 469 aaKnown RBP14.59□□□□□ -0.07
DDX55-209ENST00000542286 LETMD1Q6P1Q0 360 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 DNAJB7Q7Z6W7 309 aaPredicted RBP14.59□□□□□ -0.07
DDX55-209ENST00000542286 ADAMTS19Q8TE59 1207 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 IGSF21Q96ID5 467 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 C17orf80Q9BSJ5 609 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 FEM1AQ9BSK4 669 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 APOL5Q9BWW9 433 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 KLF16Q9BXK1 252 aaPredicted RBP14.59□□□□□ -0.07
DDX55-209ENST00000542286 HIPK3Q9H422 1215 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 ELAC1Q9H777 363 aaKnown RBP14.59□□□□□ -0.07
DDX55-209ENST00000542286 INTS7Q9NVH2 962 aaKnown RBP14.59□□□□□ -0.07
DDX55-209ENST00000542286 EPS15L1Q9UBC2 864 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 SUCOQ9UBS9 1254 aaKnown RBP14.59□□□□□ -0.07
DDX55-209ENST00000542286 OAS3Q9Y6K5 1087 aaKnown RBP14.59□□□□□ -0.07
DDX55-209ENST00000542286 CROCCQ5TZA2 2017 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 TMEM247A6NEH6 219 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 E2F6O75461 281 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 H6PDO95479 791 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 LBPP18428 481 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 HOXD12P35452 270 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 SLC26A3P40879 764 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 ERVPABLB-1P60509 514 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 RHDQ02161 417 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 BFSP2Q13515 415 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 MAPRE2Q15555 327 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 MAP7D1Q3KQU3 841 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 RFLNAQ6ZTI6 216 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 DHFR2Q86XF0 187 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 GPSM1Q86YR5 675 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 RHEBL1Q8TAI7 183 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 COX4I2Q96KJ9 171 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 CWH43Q9H720 699 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 SYTL2Q9HCH5 934 aa14.59□□□□□ -0.07
DDX55-209ENST00000542286 INTS10Q9NVR2 710 aaKnown RBP14.59□□□□□ -0.07
DDX55-209ENST00000542286 SOCS2O14508 198 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 FFAR3O14843 346 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 GPR42O15529 346 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 SNX2O60749 519 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 VPS26AO75436 327 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 TRIM16O95361 564 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 CLDN7O95471 211 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 CLIC3O95833 236 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 RPS17P08708 135 aaKnown RBP14.58□□□□□ -0.07
DDX55-209ENST00000542286 SLC6A2P23975 617 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 TUFMP49411 452 aaKnown RBP14.58□□□□□ -0.07
DDX55-209ENST00000542286 KPNA1P52294 538 aaPredicted RBP14.58□□□□□ -0.07
DDX55-209ENST00000542286 TGFBIQ15582 683 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 TSPAN33Q86UF1 283 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 CHERPQ8IWX8 916 aaKnown RBP14.58□□□□□ -0.07
DDX55-209ENST00000542286 ZNF461Q8TAF7 563 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 NSUN3Q9H649 340 aaKnown RBP14.58□□□□□ -0.07
DDX55-209ENST00000542286 SELENONQ9NZV5 590 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 NDUFAF1Q9Y375 327 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 CPQQ9Y646 472 aa14.58□□□□□ -0.07
DDX55-209ENST00000542286 PLXNA4Q9HCM2 1894 aa14.58□□□□□ -0.08
DDX55-209ENST00000542286 KIAA0100Q14667 2235 aaKnown RBP14.58□□□□□ -0.08
DDX55-209ENST00000542286 ANAPC1Q9H1A4 1944 aa14.58□□□□□ -0.08
DDX55-209ENST00000542286 NUP214P35658 2090 aaPredicted RBP14.58□□□□□ -0.08
DDX55-209ENST00000542286 ZNF24P17028 368 aa14.58□□□□□ -0.08
DDX55-209ENST00000542286 HALP42357 657 aa14.58□□□□□ -0.08
DDX55-209ENST00000542286 STK19P49842 368 aaPredicted RBP14.58□□□□□ -0.08
DDX55-209ENST00000542286 CDH18Q13634 790 aa14.58□□□□□ -0.08
DDX55-209ENST00000542286 CCDC92Q53HC0 331 aaPredicted RBP14.58□□□□□ -0.08
DDX55-209ENST00000542286 C8orf82Q6P1X6 216 aaPredicted RBP14.58□□□□□ -0.08
DDX55-209ENST00000542286 NCEH1Q6PIU2 408 aa14.58□□□□□ -0.08
DDX55-209ENST00000542286 RALGPS2Q86X27 583 aaPredicted RBP14.58□□□□□ -0.08
DDX55-209ENST00000542286 ZSWIM9Q86XI8 627 aa14.58□□□□□ -0.08
DDX55-209ENST00000542286 DCUN1D5Q9BTE7 237 aa14.58□□□□□ -0.08
DDX55-209ENST00000542286 CIPCQ9C0C6 399 aa14.58□□□□□ -0.08
DDX55-209ENST00000542286 SARDHQ9UL12 918 aa14.58□□□□□ -0.08
DDX55-209ENST00000542286 GPR45Q9Y5Y3 372 aa14.58□□□□□ -0.08
DDX55-209ENST00000542286 GBF1Q92538 1859 aa14.58□□□□□ -0.08
DDX55-209ENST00000542286 E2F3O00716 465 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 FGF4P08620 206 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 CTSOP43234 321 aaPredicted RBP14.57□□□□□ -0.08
DDX55-209ENST00000542286 ZFP36L2P47974 494 aaKnown RBP14.57□□□□□ -0.08
DDX55-209ENST00000542286 DGKQP52824 942 aa14.57□□□□□ -0.08
DDX55-209ENST00000542286 IL2P60568 153 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms