RNA–Protein interactions for RNA: ENST00000490262.1

SREBF2-207, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 450 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-207ENST00000490262 PKP3Q9Y446 797 aa11.6□□□□□ -0.55
SREBF2-207ENST00000490262 RPS6KL1Q9Y6S9 549 aa11.6□□□□□ -0.55
SREBF2-207ENST00000490262 GAPDHSO14556 408 aaPredicted RBP11.59□□□□□ -0.55
SREBF2-207ENST00000490262 GPR39O43194 453 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 LCA5LO95447 670 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 TCN2P20062 427 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 OAS2P29728 719 aaKnown RBP11.59□□□□□ -0.55
SREBF2-207ENST00000490262 CA5AP35218 305 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 MC1RQ01726 317 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 XRCC4Q13426 336 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 ITGA9Q13797 1035 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 IL11RAQ14626 422 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 CRTC2Q53ET0 693 aaPredicted RBP11.59□□□□□ -0.55
SREBF2-207ENST00000490262 GPRC6AQ5T6X5 926 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 IRGCQ6NXR0 463 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 TMEM220Q6QAJ8 160 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 C6orf15Q6UXA7 325 aaPredicted RBP11.59□□□□□ -0.55
SREBF2-207ENST00000490262 FAM92BQ6ZTR7 304 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 BBS12Q6ZW61 710 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 PTRH1Q86Y79 214 aaKnown RBP11.59□□□□□ -0.55
SREBF2-207ENST00000490262 KLHL6Q8WZ60 621 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 RNF31Q96EP0 1072 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 RBM41Q96IZ5 413 aaKnown RBP11.59□□□□□ -0.55
SREBF2-207ENST00000490262 HEMGNQ9BXL5 484 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 RAB33BQ9H082 229 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 RSPH14Q9UHP6 348 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 PSMD13Q9UNM6 376 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 TFR2Q9UP52 801 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.59□□□□□ -0.55
SREBF2-207ENST00000490262 PCDHA13Q9Y5I0 950 aa11.59□□□□□ -0.55
SREBF2-207ENST00000490262 DNMT3AQ9Y6K1 912 aaPredicted RBP11.59□□□□□ -0.55
SREBF2-207ENST00000490262 OR2AG2A6NM03 316 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 APOC4-APOC2K7ER74 178 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 STX7O15400 261 aaKnown RBP11.58□□□□□ -0.56
SREBF2-207ENST00000490262 NDUFA10O95299 355 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 AGTP01019 485 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 APOC2P02655 101 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 FGF5P12034 268 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 FECHP22830 423 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 F8A1P23610 371 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 RBL1P28749 1068 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 DLSTP36957 453 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 NFE2L1Q14494 772 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 PTPRCAPQ14761 206 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 SPA17Q15506 151 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 RPE65Q16518 533 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 DEFB109BQ30KR1 87 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 C11orf63Q6NUN7 778 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 C16orf46Q6P387 395 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 FAM83HQ6ZRV2 1179 aaPredicted RBP11.58□□□□□ -0.56
SREBF2-207ENST00000490262 RASGRP3Q8IV61 690 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 GALNT6Q8NCL4 622 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 GPR150Q8NGU9 434 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 ZNF398Q8TD17 642 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 KRT35Q92764 455 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 ELMO2Q96JJ3 720 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 FSD1LQ9BXM9 530 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 GBA3Q9H227 469 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 C10orf88Q9H8K7 445 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 SMOXQ9NWM0 555 aa11.58□□□□□ -0.56
SREBF2-207ENST00000490262 MRPS18BQ9Y676 258 aaKnown RBP11.58□□□□□ -0.56
SREBF2-207ENST00000490262 UBR5O95071 2799 aaPredicted RBP11.58□□□□□ -0.56
SREBF2-207ENST00000490262 IGHV5-51A0A0C4DH38 117 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 GOLGA6L3A6NEY3 463 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 H7C0C1 242 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 SPAG6O75602 509 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 ANXA9O76027 345 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 KIAA0754O94854 1291 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 PRAMEF1O95521 474 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 NELFEP18615 380 aaKnown RBP11.57□□□□□ -0.56
SREBF2-207ENST00000490262 MSH3P20585 1137 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 AKT1P31749 480 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 ATP5OP48047 213 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 GEMP55040 296 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 PPP1CAP62136 330 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 TLE1Q04724 770 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 LONRF2Q1L5Z9 754 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.57□□□□□ -0.56
SREBF2-207ENST00000490262 FNBP1LQ5T0N5 605 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 ATP1A1-AS1Q5TC04 95 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 METRNLQ641Q3 311 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 ITPRIPL1Q6GPH6 555 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 KLHL35Q6PF15 583 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 SARM1Q6SZW1 724 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 RANBP10Q6VN20 620 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 DAAM2Q86T65 1068 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 PPP1R3BQ86XI6 285 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 CCDC170Q8IYT3 715 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 BEND7Q8N7W2 519 aaPredicted RBP11.57□□□□□ -0.56
SREBF2-207ENST00000490262 C9orf43Q8TAL5 461 aaPredicted RBP11.57□□□□□ -0.56
SREBF2-207ENST00000490262 APOBEC4Q8WW27 367 aaKnown RBP11.57□□□□□ -0.56
SREBF2-207ENST00000490262 UBXN4Q92575 508 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 STAMBPL1Q96FJ0 436 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 ZNF514Q96K75 400 aaPredicted RBP11.57□□□□□ -0.56
SREBF2-207ENST00000490262 GORASP1Q9BQQ3 440 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 FICDQ9BVA6 458 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 TRIM5Q9C035 493 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 ZNF71Q9NQZ8 489 aaPredicted RBP11.57□□□□□ -0.56
SREBF2-207ENST00000490262 SEMA5BQ9P283 1151 aa11.57□□□□□ -0.56
SREBF2-207ENST00000490262 LNPEPQ9UIQ6 1025 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms