RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 UBE2HP62256 183 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 HSD11B2P80365 405 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 GALNT2Q10471 571 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 ABRQ12979 859 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 FKBP15Q5T1M5 1219 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 VWA5B1Q5TIE3 1220 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 LRRC49Q8IUZ0 686 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 CCHCR1Q8TD31 782 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 PPM1MQ96MI6 270 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 ZSCAN5AQ9BUG6 496 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 CLSTN2Q9H4D0 955 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 KCND1Q9NSA2 647 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 RBM22Q9NW64 420 aaKnown RBP eCLIP16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 NFKBIL1Q9UBC1 381 aaPredicted RBP16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 G3BP2Q9UN86 482 aaKnown RBP16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 TTLL3Q9Y4R7 772 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 FER1L5A0AVI2 2057 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 ZNF165P49910 485 aa16.79■□□□□ 0.28
UBE2D4-209ENST00000454428 GSDMDP57764 484 aa16.79■□□□□ 0.28
UBE2D4-209ENST00000454428 MMRN1Q13201 1228 aa16.79■□□□□ 0.28
UBE2D4-209ENST00000454428 RPE65Q16518 533 aa16.79■□□□□ 0.28
UBE2D4-209ENST00000454428 BOLA3Q53S33 107 aa16.79■□□□□ 0.28
UBE2D4-209ENST00000454428 ZNF789Q5FWF6 425 aa16.79■□□□□ 0.28
UBE2D4-209ENST00000454428 TRAM1L1Q8N609 369 aa16.79■□□□□ 0.28
UBE2D4-209ENST00000454428 ENOX1Q8TC92 643 aaKnown RBP16.79■□□□□ 0.28
UBE2D4-209ENST00000454428 FATE1Q969F0 183 aa16.79■□□□□ 0.28
UBE2D4-209ENST00000454428 MOCOSQ96EN8 888 aa16.79■□□□□ 0.28
UBE2D4-209ENST00000454428 LATS2Q9NRM7 1088 aa16.79■□□□□ 0.28
UBE2D4-209ENST00000454428 CCDC88CQ9P219 2028 aa16.79■□□□□ 0.28
UBE2D4-209ENST00000454428 OR5K3A6NET4 321 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 F5H423 210 aaPredicted RBP16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 DDX3YO15523 660 aaKnown RBP16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 VEGFDO43915 354 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 CDK14O94921 469 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 LCA5LO95447 670 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 CD48P09326 243 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 FERP16591 822 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 GALNT3Q14435 633 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 ZRSR2Q15696 482 aaKnown RBP16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 DNTTIP2Q5QJE6 756 aaKnown RBP16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 FAM182AQ5T1J6 154 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 NCBP2-AS2Q69YL0 99 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 PDPK2PQ6A1A2 396 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 SP5Q6BEB4 398 aaPredicted RBP16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 FBXO38Q6PIJ6 1188 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 IGFL3Q6UXB1 125 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 CUZD1Q86UP6 607 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 OR8K5Q8NH50 307 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 UBE2Q2Q8WVN8 375 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 ZNF653Q96CK0 615 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 TRIB3Q96RU7 358 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 CD180Q99467 661 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 ZFYVE1Q9HBF4 777 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 ZBTB20Q9HC78 741 aaPredicted RBP16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 PCMTD2Q9NV79 361 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 AMACRQ9UHK6 382 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 SHOC2Q9UQ13 582 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 PCDHGA10Q9Y5H3 936 aa16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 COPG1Q9Y678 874 aaKnown RBP16.78■□□□□ 0.28
UBE2D4-209ENST00000454428 UBA6A0AVT1 1052 aaPredicted RBP16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 LGALS16A8MUM7 142 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 E2F3O00716 465 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 LRRTM2O43300 516 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 FTLP02792 175 aaPredicted RBP16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 KLK3P07288 261 aaPredicted RBP16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 PIRTP0C851 137 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 BPIP17213 487 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 CA4P22748 312 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 ARL4DP49703 201 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 RRADP55042 308 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 SLC25A11Q02978 314 aaKnown RBP16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 ELOAQ14241 798 aaKnown RBP16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 SPOCD1Q6ZMY3 1216 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 FAM83HQ6ZRV2 1179 aaPredicted RBP16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 TMC3Q7Z5M5 1100 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 MCEMP1Q8IX19 187 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 ST6GALNAC3Q8NDV1 305 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 FAM71BQ8TC56 605 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 TEKT4Q8WW24 435 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 TSGA13Q96PP4 275 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 ERGIC2Q96RQ1 377 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 ZNF552Q9H707 407 aaPredicted RBP16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 BTRCQ9Y297 605 aa16.77■□□□□ 0.28
UBE2D4-209ENST00000454428 CCDC168Q8NDH2 2452 aa16.77■□□□□ 0.27
UBE2D4-209ENST00000454428 DNHD1Q96M86 4753 aa16.77■□□□□ 0.27
UBE2D4-209ENST00000454428 ZGRF1Q86YA3 2104 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 ZBTB11O95625 1053 aaPredicted RBP16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 CCNCP24863 283 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 CD86P42081 329 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 ARSEP51690 589 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 KPNA2P52292 529 aaKnown RBP16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 NCF4Q15080 339 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 PAFAH1B3Q15102 231 aaKnown RBP16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 CT47A1Q5JQC4 288 aaPredicted RBP16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 PPP1R2P3Q6NXS1 205 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 Q6ZS92 163 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 APTXQ7Z2E3 356 aaKnown RBP16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 SYTL1Q8IYJ3 562 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 TTC30BQ8N4P2 665 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 CPT1BQ92523 772 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms