RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 FLT1P17948 1338 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 A0A1B0GUL7 405 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 SOCS6O14544 535 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 KLK8O60259 260 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 NDUFS7O75251 213 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 TIPRLO75663 272 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 LDHAP00338 332 aaKnown RBP4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 ASGR1P07306 291 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 UQCRFS1P1P0C7P4 283 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 ACTN1P12814 892 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 SRCP12931 536 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 KCNA5P22460 613 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 CHATP28329 748 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 DDX10Q13206 875 aaKnown RBP4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 ATP13A5Q4VNC0 1218 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 WDR45BQ5MNZ6 344 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 B3GNT6Q6ZMB0 384 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 GPAT4Q86UL3 456 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 SFR1Q86XK3 245 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 LSM14AQ8ND56 463 aaKnown RBP4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 PHOSPHO2Q8TCD6 241 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 RUFY2Q8WXA3 655 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 TMEM19Q96HH6 336 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 ZNF570Q96NI8 536 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 NEUROD6Q96NK8 337 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 RPS6KC1Q96S38 1066 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 MXRA8Q9BRK3 442 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 PRKRIP1Q9H875 184 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 LRRC4Q9HBW1 653 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 SNTG1Q9NSN8 517 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 KCNS2Q9ULS6 477 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 FOCADQ5VW36 1801 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 SYNRGQ9UMZ2 1314 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 MID1O15344 667 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 TCEA3O75764 348 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 CABYRO75952 493 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 FLOT1O75955 427 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 CD4P01730 458 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 UBTFL1P0CB47 393 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 CD58P19256 250 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 ADORA1P30542 326 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 BIRC2Q13490 618 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 RBBP5Q15291 538 aaKnown RBP4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 PPP6R3Q5H9R7 873 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 ZNF667Q5HYK9 610 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 SERTAD4-AS1Q5TG53 156 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 LRRC8EQ6NSJ5 796 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 FAM122CQ6P4D5 195 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 WDR73Q6P4I2 378 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 ZNF449Q6P9G9 518 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 CASC1Q6TDU7 716 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 FOXL2NBQ6ZUU3 175 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 SATL1Q86VE3 508 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 EXOC8Q8IYI6 725 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 NKAPQ8N5F7 415 aaKnown RBP4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 UHRF2Q96PU4 802 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 ARPC5LQ9BPX5 153 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 PHF7Q9BWX1 381 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 UPF3BQ9BZI7 483 aaKnown RBP4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 SH2D4AQ9H788 454 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 DNAJC18Q9H819 358 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 HMG20BQ9P0W2 317 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 CARD8Q9Y2G2 431 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 COMMD10Q9Y6G5 202 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 BRWD1Q9NSI6 2320 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 CFAP54Q96N23 3096 aa4.8□□□□□ -1.64
HMGB3P5-201ENST00000428894 SIPA1L1O43166 1804 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 TTC36A6NLP5 189 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 ZNF587BE7ETH6 402 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 DCXO43602 365 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 PLRG1O43660 514 aaKnown RBP4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 CRYAAP02489 173 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 CA3P07451 260 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 SUPT20HL2P0C7V6 817 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 EDN2P20800 178 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 RFC2P35250 354 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 VEPH1Q14D04 833 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 TAF11Q15544 211 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 CCDC158Q5M9N0 1113 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 TADA2BQ86TJ2 420 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 NOXA1Q86UR1 476 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 SPATA22Q8NHS9 363 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 LNX1Q8TBB1 728 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 ACER1Q8TDN7 264 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 ARNTL2Q8WYA1 636 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 RND1Q92730 232 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 KXD1Q9BQD3 176 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 MMP28Q9H239 520 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 KIAA1456Q9P272 454 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 CTNNA3Q9UI47 895 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 PRDM4Q9UKN5 801 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 ZHX1Q9UKY1 873 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 KIF26BQ2KJY2 2108 aa4.79□□□□□ -1.64
HMGB3P5-201ENST00000428894 PTPRZ1P23471 2315 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 CACNA1AO00555 2505 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 MPHOSPH10O00566 681 aaKnown RBP4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 WDR46O15213 610 aaKnown RBP4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 PGK2P07205 417 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 ETFAP13804 333 aa4.78□□□□□ -1.64
HMGB3P5-201ENST00000428894 MYOGP15173 224 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms