RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TBC1D3HP0C7X1 549 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 RGRP47804 291 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 CREB5Q02930 508 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 LRRC26Q2I0M4 334 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 TBC1D3GQ6DHY5 549 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 SULT1C3Q6IMI6 304 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 TBC1D3CQ6IPX1 549 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 DHDDSQ86SQ9 333 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 TBC1D3Q8IZP1 549 aaPredicted RBP13.86□□□□□ -0.19
SCAF4-202ENST00000399804 C2orf73Q8N5S3 287 aaPredicted RBP13.86□□□□□ -0.19
SCAF4-202ENST00000399804 FAM156AQ8NDB6 213 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 ACVR1CQ8NER5 493 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 WFIKKN2Q8TEU8 576 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 SKA1Q96BD8 255 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 APOLD1Q96LR9 279 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 MAGEE1Q9HCI5 957 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 DNAJC11Q9NVH1 559 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 AHSPQ9NZD4 102 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 SLC7A8Q9UHI5 535 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 RGPD3A6NKT7 1758 aaPredicted RBP13.86□□□□□ -0.19
SCAF4-202ENST00000399804 RGPD4Q7Z3J3 1758 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 SYNDIG1LA6NDD5 238 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 CYP2A13Q16696 494 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 ACSBG2Q5FVE4 666 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 ANKRD27Q96NW4 1050 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 SMIM14Q96QK8 99 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 LINC00597Q9H2U6 94 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 SMAD6O43541 496 aaKnown RBP13.86□□□□□ -0.19
SCAF4-202ENST00000399804 SOCS5O75159 536 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 KCNH1O95259 989 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 LATS1O95835 1130 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 HLA-EP13747 358 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 HSPA13P48723 471 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 THOP1P52888 689 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 VAC14Q08AM6 782 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 TECRLQ5HYJ1 363 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 LIMS2Q7Z4I7 341 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 SPATA19Q7Z5L4 167 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 MMAAQ8IVH4 418 aaKnown RBP13.86□□□□□ -0.19
SCAF4-202ENST00000399804 PGAM4Q8N0Y7 254 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 CPSF7Q8N684 471 aaKnown RBP13.86□□□□□ -0.19
SCAF4-202ENST00000399804 KCNJ9Q92806 393 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 SCAMP4Q969E2 229 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 REPS1Q96D71 796 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 PRR11Q96HE9 360 aaPredicted RBP13.86□□□□□ -0.19
SCAF4-202ENST00000399804 PPM1MQ96MI6 270 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 ZNF334Q9HCZ1 680 aaPredicted RBP13.86□□□□□ -0.19
SCAF4-202ENST00000399804 PCDH12Q9NPG4 1184 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 SNX5Q9Y5X3 404 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 I6L893 689 aaPredicted RBP13.85□□□□□ -0.19
SCAF4-202ENST00000399804 WFS1O76024 890 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 CLDN9O95484 217 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 TRBC1P01850 177 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 PSMC3P17980 439 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 CHI3L1P36222 383 aaPredicted RBP13.85□□□□□ -0.19
SCAF4-202ENST00000399804 NRF1Q16656 503 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 GCNT7Q6ZNI0 430 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 FRMD7Q6ZUT3 714 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 HORMAD1Q86X24 394 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 DERL2Q9GZP9 239 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 LRTM1Q9HBL6 345 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 COPG1Q9Y678 874 aaKnown RBP13.85□□□□□ -0.19
SCAF4-202ENST00000399804 EPCAMP16422 314 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 HNF4AP41235 474 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 GDF5P43026 501 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 FAM98BQ52LJ0 330 aaKnown RBP13.85□□□□□ -0.19
SCAF4-202ENST00000399804 NCEH1Q6PIU2 408 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 ISLR2Q6UXK2 745 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 ANKRD33Q7Z3H0 272 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 TMEM132CQ8N3T6 1108 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 ZNF555Q8NEP9 628 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 SLC46A2Q9BY10 475 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 AKTIPQ9H8T0 292 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 IL36AQ9UHA7 158 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 ANKDD1BA6NHY2 528 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 WNT9AO14904 365 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 LDB2O43679 373 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 LDLRP01130 860 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 DNTTP04053 509 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 PRDX6P30041 224 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 SH3BGRP55822 239 aaPredicted RBP13.85□□□□□ -0.19
SCAF4-202ENST00000399804 NFATC2Q13469 925 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 DMC1Q14565 340 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 ZFYVE19Q96K21 471 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 OR52E6Q96RD3 313 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 NSUN3Q9H649 340 aaKnown RBP13.85□□□□□ -0.19
SCAF4-202ENST00000399804 ARNT2Q9HBZ2 717 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 GPSM3Q9Y4H4 160 aa13.85□□□□□ -0.19
SCAF4-202ENST00000399804 SLC35G4P0C7Q5 338 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 AOC1P19801 751 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 MRPL58Q14197 206 aaKnown RBP13.84□□□□□ -0.19
SCAF4-202ENST00000399804 ARMC6Q6NXE6 501 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 AMIGO2Q86SJ2 522 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 ITFG1Q8TB96 612 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 ANKRD49Q8WVL7 239 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 STX18Q9P2W9 335 aaKnown RBP13.84□□□□□ -0.19
SCAF4-202ENST00000399804 SNX8Q9Y5X2 465 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 FCGR1AP12314 374 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 HMGCLP35914 325 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 VIPR2P41587 438 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms