RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 C4orf46Q504U0 113 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 CRTC2Q53ET0 693 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 RUNDC3AQ59EK9 446 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 CLEC12AQ5QGZ9 265 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 PLPP4Q5VZY2 271 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 TMPRSS11AQ6ZMR5 421 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 ZNF280BQ86YH2 543 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 KLK6Q92876 244 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 KCNMB3Q9NPA1 279 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 GMIPQ9P107 970 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 NKRFO15226 690 aaKnown RBP eCLIP16.65■□□□□ 0.262e-6■□□□□ 8.4
TSPAN3-201ENST00000267970 UGT2B4P06133 528 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 HSD3B2P26439 372 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 ACADLP28330 430 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 CDH15P55291 814 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 GNA12Q03113 381 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 APOBEC3HQ6NTF7 200 aaKnown RBP16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 BBS12Q6ZW61 710 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 P2RY8Q86VZ1 359 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 GALNT15Q8N3T1 639 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 HAVCR1Q96D42 359 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 TEFMQ96QE5 360 aaKnown RBP16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 CNTNAP4Q9C0A0 1308 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 OR14I1A6ND48 311 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 XKRYO14609 159 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 PRKCGP05129 697 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 MATKP42679 507 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 CNPY1Q3B7I2 92 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 TTC29Q8NA56 475 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 CXorf21Q9HAI6 301 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 SMPD3Q9NY59 655 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 CKLFQ9UBR5 152 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 FAM86C2PA6NEL3 165 aa16.64■□□□□ 0.26
TSPAN3-201ENST00000267970 UROSP10746 265 aa16.64■□□□□ 0.26
TSPAN3-201ENST00000267970 SLC44A1Q8WWI5 657 aa16.64■□□□□ 0.26
TSPAN3-201ENST00000267970 ABHD16BQ9H3Z7 469 aa16.64■□□□□ 0.26
TSPAN3-201ENST00000267970 CERS4Q9HA82 394 aa16.64■□□□□ 0.26
TSPAN3-201ENST00000267970 IFT46Q9NQC8 304 aa16.64■□□□□ 0.26
TSPAN3-201ENST00000267970 CST3P01034 146 aaPredicted RBP16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 KCNA5P22460 613 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 AXLP30530 894 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 PPP1R15BQ5SWA1 713 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 RBFAQ8N0V3 343 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 OR5T3Q8NGG3 340 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 GAL3ST4Q96RP7 486 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 SALL4Q9UJQ4 1053 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 FSCN2O14926 492 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 SCGB1D2O95969 90 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 GABRR2P28476 465 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 FAUP35544 74 aaKnown RBP16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 IGFALSP35858 605 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 GTF2H2Q13888 395 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 ODF4Q2M2E3 257 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 DCST1Q5T197 706 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 BICRALQ6AI39 1079 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 GTF2H2CQ6P1K8 395 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 PCDHGC4Q9Y5F7 938 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 PDLIM1O00151 329 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 FGBP02675 491 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 PHC1P78364 1004 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 ZNF627Q7L945 461 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 RDH11Q8TC12 318 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 ZNF398Q8TD17 642 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 ACMSDQ8TDX5 336 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 CSPG4P5Q96PW8 444 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 EBF4Q9BQW3 602 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 PSMA1P25786 263 aaKnown RBP16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 SKP1P63208 163 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 MRPS6P82932 125 aaKnown RBP16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 LAPTM5Q13571 262 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 IQCHQ86VS3 1027 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 XYLT1Q86Y38 959 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 HOPXQ9BPY8 73 aaPredicted RBP16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 CADM1Q9BY67 442 aaKnown RBP16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 APOC1P02654 83 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 NOMO2Q5JPE7 1267 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 ZBTB2Q8N680 514 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 CPT1BQ92523 772 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 CLCC1Q96S66 551 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 TMEM134Q9H6X4 195 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 CFAP97Q9P2B7 532 aa16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 FCF1Q9Y324 198 aaKnown RBP16.64■□□□□ 0.25
TSPAN3-201ENST00000267970 CNTNAP1P78357 1384 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 GLYATL1P3A0A0U1RQE8 302 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 QSOX1O00391 747 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 PLOD2O00469 737 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 GRIN3BO60391 1043 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 ANXA4P09525 319 aaPredicted RBP16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 ARL3P36405 182 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 GNPDA1P46926 289 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 PGDP52209 483 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 TSPAN5P62079 268 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 SLC9B1Q4ZJI4 515 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 CHSY3Q70JA7 882 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 CPNE8Q86YQ8 564 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 CCNB1IP1Q9NPC3 277 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 RIMKLBQ9ULI2 386 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 MED31Q9Y3C7 131 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 FABP12A6NFH5 140 aa16.63■□□□□ 0.25
TSPAN3-201ENST00000267970 ARPC4P59998 168 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms