RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 CPNE3O75131 537 aaKnown RBP16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 RNF8O76064 485 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 MTA2O94776 668 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 JCHAINP01591 159 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 CAPN1P07384 714 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 HNRNPH3P31942 346 aaKnown RBP16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 ACY1Q03154 408 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 RAPSNQ13702 412 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 QPCTQ16769 361 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 AGAP9Q5VTM2 703 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 CDKAL1Q5VV42 579 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 TXNRD3NBQ6F5E7 133 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 WASH2PQ6VEQ5 465 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 C11orf96Q7Z7L8 435 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 RBM12BQ8IXT5 1001 aaKnown RBP16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 D2HGDHQ8N465 521 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 ENDOVQ8N8Q3 282 aaKnown RBP16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 GPR26Q8NDV2 337 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 GPR150Q8NGU9 434 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 MAML1Q92585 1016 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 ZNF501Q96CX3 271 aaPredicted RBP16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 MAP3K3Q99759 626 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 TIMM29Q9BSF4 260 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 UNKQ9C0B0 810 aaKnown RBP16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 PCDH9Q9HC56 1237 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 GPR83Q9NYM4 423 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 PKD2L2Q9NZM6 624 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 GPR89AB7ZAQ6 455 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 SCRG1O75711 98 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 SLC25A14O95258 325 aaPredicted RBP16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 GPR89BP0CG08 455 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 ATP1A3P13637 1013 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 ARL4AP40617 200 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 RPL26P61254 145 aaKnown RBP16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 MDC1Q14676 2089 aaKnown RBP16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 GPR19Q15760 415 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 ANKRD20A8PQ5CZ79 823 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 ZNF569Q5MCW4 686 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 PLEKHS1Q5SXH7 462 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 PRAMEF17Q5VTA0 474 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 IRF2BP2Q7Z5L9 587 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 IQCKQ8N0W5 287 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 MLPHQ9BV36 600 aaPredicted RBP16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 TRIM10Q9UDY6 481 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 TCFL5Q9UL49 500 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 TMPRSS11EQ9UL52 423 aa16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 RPL26L1Q9UNX3 145 aaKnown RBP16.83■□□□□ 0.28
UBE2D4-209ENST00000454428 ARHGAP10A1A4S6 786 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 KMOO15229 486 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 HNRNPRO43390 633 aaKnown RBP16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 MTX2O75431 263 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 MMP2P08253 660 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 RAB40ALP0C0E4 278 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 RORAP35398 523 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 PCK1P35558 622 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 VAV2P52735 878 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 TUBB4BP68371 445 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 PDE1BQ01064 536 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 TUBB2AQ13885 445 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 ALS2CLQ60I27 953 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 MED25Q71SY5 747 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 LRRTM4Q86VH4 590 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 TMEM102Q8N9M5 508 aaPredicted RBP16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 HSPH1Q92598 858 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 GLYATL1Q969I3 302 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 CXorf40BQ96DE9 158 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 PCMTD1Q96MG8 357 aaPredicted RBP16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 LRFN5Q96NI6 719 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 TUBB2BQ9BVA1 445 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 SPATA16Q9BXB7 569 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 PCDH18Q9HCL0 1135 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 SNX7Q9UNH6 387 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 ENTPD4Q9Y227 616 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 B3GNT3Q9Y2A9 372 aa16.82■□□□□ 0.28
UBE2D4-209ENST00000454428 SEC16AO15027 2179 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 ANKRD66B4E2M5 251 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 MFSD11O43934 449 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 RARAP10276 462 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 FECHP22830 423 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 CDK18Q07002 472 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 ATP1A4Q13733 1029 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 FAM198BQ6UWH4 519 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 KMT5CQ86Y97 462 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 TMEM126BQ8IUX1 230 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 DSELQ8IZU8 1212 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 NEK11Q8NG66 645 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 LRRN4Q8WUT4 740 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 NUP85Q9BW27 656 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 NLNQ9BYT8 704 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 C5AR2Q9P296 337 aa16.81■□□□□ 0.28
UBE2D4-209ENST00000454428 TLCD2A6NGC4 264 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 MEN1O00255 615 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 MATN3O15232 486 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 HLA-DQB2P05538 268 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 IDSP22304 550 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 CES1P23141 567 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 CA5AP35218 305 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 SERPINB6P35237 376 aa16.8■□□□□ 0.28
UBE2D4-209ENST00000454428 DCDC1P59894 354 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms