RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 A0A0J9YVX5 310 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 A4D1N5 150 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 CTAGE15A4D2H0 777 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 NPIPB15A6NHN6 443 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 A8MVJ9 347 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 A8MXQ7 604 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 F8VP50 259 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 TSPAN4O14817 238 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 TP73O15350 636 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 RIPK2O43353 540 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 PFDN1O60925 122 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 NOL3O60936 208 aaKnown RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 PHF2O75151 1096 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 TACC1O75410 805 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 SERPINB7O75635 380 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 ZNF205O95201 554 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 FGFR1OPO95684 399 aaKnown RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 PNPP00491 289 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 RHOP08100 348 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 SPARCP09486 303 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 FTH1P19P0C7X4 201 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 CTAGE8P0CG41 777 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 MYBL1P10243 752 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 BTF3P20290 206 aaKnown RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 PCSK1P29120 753 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 ADORA2BP29275 332 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 GTF2H1P32780 548 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 MDH1P40925 334 aaKnown RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 MTIF2P46199 727 aaKnown RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 LHX1P48742 406 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 ARFIP1P53367 373 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 GNG11P61952 73 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 BASP1P80723 227 aaKnown RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 HPCAP84074 193 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 HTD2P86397 168 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 CYP4F8P98187 520 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 ENPEPQ07075 957 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 CTBP1Q13363 440 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 TUBA3CQ13748 450 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 ITGA9Q13797 1035 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 DPYSQ14117 519 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 MORF4L2Q15014 288 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 MED22Q15528 200 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 GSTA3Q16772 222 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 STXBP5Q5T5C0 1151 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 KRT80Q6KB66 452 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 GJB7Q6PEY0 223 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 INO80CQ6PI98 192 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 FOXR2Q6PJQ5 311 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 CCNI2Q6ZMN8 369 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 PLEKHM3Q6ZWE6 761 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 LPCAT2Q7L5N7 544 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 NLRP9Q7RTR0 991 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 ZNF572Q7Z3I7 529 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 CACNA2D4Q7Z3S7 1137 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 ACOT1Q86TX2 421 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 CTAGE6Q86UF2 777 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 SPATA2LQ8IUW3 424 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 GRAMD2AQ8IUY3 354 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 ARHGEF19Q8IW93 802 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 CCDC28AQ8IWP9 274 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 CTAGE4Q8IX94 777 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 TUSC5Q8IXB3 177 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 YAF2Q8IY57 180 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 DCP1BQ8IZD4 617 aaKnown RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 Q8N1Y9 231 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 MPP5Q8N3R9 675 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 MREGQ8N565 214 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 ZNF655Q8N720 491 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 C12orf29Q8N999 325 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 SPERTQ8NA61 448 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 B3GALNT2Q8NCR0 500 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 ITFG1Q8TB96 612 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 SPPL2BQ8TCT7 592 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 UBASH3BQ8TF42 649 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 ZNF75CPQ92670 426 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 CAVIN3Q969G5 261 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 EFHD2Q96C19 240 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 CYFIP2Q96F07 1278 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 PCED1BQ96HM7 432 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 Q96M66 194 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 NECTIN4Q96NY8 510 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 RAB3IPQ96QF0 476 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 ACBD6Q9BR61 282 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 MED10Q9BTT4 135 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 C1orf43Q9BWL3 253 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 TEX12Q9BXU0 123 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 ELOVL4Q9GZR5 314 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 INTS2Q9H0H0 1204 aaKnown RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 GBA3Q9H227 469 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 VPS16Q9H269 839 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 MANSC1Q9H8J5 431 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 IL21RQ9HBE5 538 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 WDR6Q9NNW5 1121 aaKnown RBP4.56□□□□□ -1.68
SF3B1-202ENST00000409915 SLC6A20Q9NP91 592 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 TCF7L2Q9NQB0 619 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 TPSG1Q9NRR2 321 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 AP5S1Q9NUS5 200 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 FAIMQ9NVQ4 179 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms