RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CCDC148Q8NFR7 591 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 OR4N2Q8NGD1 307 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 HSPH1Q92598 858 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 ATP6V0A1Q93050 837 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 MAELQ96JY0 434 aaKnown RBP3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 CD180Q99467 661 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 CDX2Q99626 313 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 LMAN2LQ9H0V9 348 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 SMARCAD1Q9H4L7 1026 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 SLC28A3Q9HAS3 691 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 PLAC1Q9HBJ0 212 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 C6orf50Q9HD87 102 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 KRCC1Q9NPI7 259 aaPredicted RBP3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 TMEM160Q9NX00 188 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 ERAP1Q9NZ08 941 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 CYP46A1Q9Y6A2 500 aa3.77□□□□□ -1.81
CKS1BP3-201ENST00000600888 PRUNE2Q8WUY3 3088 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 TCF20Q9UGU0 1960 aaKnown RBP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 KDM3AQ9Y4C1 1321 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 RRN3P2A6NIE6 340 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 RSPH10B2B2RC85 870 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 FAM86B1E9PN63 330 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 KCNAB3O43448 404 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 EDIL3O43854 480 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 DEXIO95424 95 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 ADAP00813 363 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 LCATP04180 440 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 CENPBP07199 599 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 FAM86B2P0C5J1 330 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 RSPH10BP0C881 870 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 CNTFP26441 200 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 CDC25AP30304 524 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 ARRB2P32121 409 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 MAPK9P45984 424 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 ENTPD1P49961 510 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 CDH12P55289 794 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 ZP1P60852 638 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 SETQ01105 290 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 ROR2Q01974 943 aaKnown RBP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 AKAP17AQ02040 695 aaKnown RBP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 ITGB3BPQ13352 177 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 RAPGEF1Q13905 1077 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 NAA25Q14CX7 972 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 MARCH8Q5T0T0 291 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 CPLX2Q6PUV4 134 aaKnown RBP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 MOXD1Q6UVY6 613 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 FAM83HQ6ZRV2 1179 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 ZNF367Q7RTV3 350 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 DEFB128Q7Z7B8 93 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 ZDHHC17Q8IUH5 632 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 SAMD14Q8IZD0 417 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 CADM3Q8N126 398 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 DNAAF1Q8NEP3 725 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 SLC35F5Q8WV83 523 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 OIT3Q8WWZ8 545 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 RAB40AQ8WXH6 277 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 CNOT9Q92600 299 aaKnown RBP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 ATOH1Q92858 354 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 APBB2Q92870 758 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 MBOAT7Q96N66 472 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 PCYT2Q99447 389 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 SDF4Q9BRK5 362 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 PHF7Q9BWX1 381 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 KRTAP17-1Q9BYP8 105 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 FTOQ9C0B1 505 aaKnown RBP eCLIP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 CATSPERBQ9H7T0 1116 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 MRPL44Q9H9J2 332 aaKnown RBP3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 ENTPD7Q9NQZ7 604 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 TBC1D22BQ9NU19 505 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 SETD4Q9NVD3 440 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 ALKBH4Q9NXW9 302 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 RRN3Q9NYV6 651 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 NCKIPSDQ9NZQ3 722 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 SLC9A2Q9UBY0 812 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 RAI2Q9Y5P3 530 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 INSL5Q9Y5Q6 135 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 EYSQ5T1H1 3165 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 REV3LO60673 3130 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 MYH11P35749 1972 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 COL1A2P08123 1366 aa3.76□□□□□ -1.81
CKS1BP3-201ENST00000600888 PLXNA4Q9HCM2 1894 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 STK36Q9NRP7 1315 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 A0A096LPK6 155 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 A0A1B0GVT2 93 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 MS4A18H0YCH9 400 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 CPLX1O14810 134 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 PER2O15055 1255 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 SPRY3O43610 288 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 PFKFB2O60825 505 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 GJB5O95377 273 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 CLDN7O95471 211 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 CHRNA1P02708 482 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 POLBP06746 335 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 FOSL2P15408 326 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 PGM1P36871 562 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 THPOP40225 353 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 GPR12P47775 334 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 PMS2P54278 862 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms