RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 FTCDO95954 541 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 HGFP14210 728 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 UGT1A6P19224 532 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 LPOP22079 712 aaPredicted RBP10.37□□□□□ -0.75
CCDC9-203ENST00000596938 UGT1A1P22309 533 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 UGT1A4P22310 534 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 PSMB4P28070 264 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 UGT1A3P35503 534 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 EPHA4P54764 986 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 TMPRSS3P57727 454 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 UBE2IP63279 158 aaKnown RBP10.37□□□□□ -0.75
CCDC9-203ENST00000596938 PDE1BQ01064 536 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 MSLNQ13421 630 aaPredicted RBP10.37□□□□□ -0.75
CCDC9-203ENST00000596938 ITGA9Q13797 1035 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 C16orf72Q14CZ0 275 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 CHRNA6Q15825 494 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 PARP6Q2NL67 630 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 KHDC1Q4VXA5 237 aaKnown RBP10.37□□□□□ -0.75
CCDC9-203ENST00000596938 LDLRAP1Q5SW96 308 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 AGAP9Q5VTM2 703 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 NKAIN2Q5VXU1 208 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 DENND5AQ6IQ26 1287 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 WDR74Q6RFH5 385 aaPredicted RBP10.37□□□□□ -0.75
CCDC9-203ENST00000596938 GPR155Q7Z3F1 870 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 C11orf96Q7Z7L8 435 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 OR10G6Q8NH81 332 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 GDAP1Q8TB36 358 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 CCDC110Q8TBZ0 833 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 ZNF398Q8TD17 642 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 LRRC45Q96CN5 670 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 AHCYL2Q96HN2 611 aaKnown RBP10.37□□□□□ -0.75
CCDC9-203ENST00000596938 TTC25Q96NG3 672 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 FAM118BQ9BPY3 351 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 FICDQ9BVA6 458 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 TSGA10Q9BZW7 698 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 EPB41L1Q9H4G0 881 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 UCK1Q9HA47 277 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 UGT1A7Q9HAW7 530 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 UGT1A10Q9HAW8 530 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 UGT1A8Q9HAW9 530 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 PRDM8Q9NQV8 689 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 CPNE7Q9UBL6 633 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 PISDQ9UG56 409 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 FEZ2Q9UHY8 353 aaPredicted RBP10.37□□□□□ -0.75
CCDC9-203ENST00000596938 PACSIN2Q9UNF0 486 aaPredicted RBP10.37□□□□□ -0.75
CCDC9-203ENST00000596938 SMG1Q96Q15 3661 aaKnown RBP10.37□□□□□ -0.75
CCDC9-203ENST00000596938 IGSF10Q6WRI0 2623 aa10.37□□□□□ -0.75
CCDC9-203ENST00000596938 RP1P56715 2156 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 TEX51A0A1B0GUA7 166 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 AGAP14A8MT82 685 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 BUD23O43709 281 aaKnown RBP10.36□□□□□ -0.75
CCDC9-203ENST00000596938 KRT86O43790 486 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 DUX1O43812 170 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 CRTAMO95727 393 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 PTMAP06454 111 aaKnown RBP10.36□□□□□ -0.75
CCDC9-203ENST00000596938 THRAP10827 490 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 VCLP18206 1134 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 ITIH1P19827 911 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 STIP1P31948 543 aaKnown RBP10.36□□□□□ -0.75
CCDC9-203ENST00000596938 CLN3Q13286 438 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 NFATC2Q13469 925 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 GTF2H3Q13889 308 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 INSCQ1MX18 579 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 SOWAHCQ53LP3 525 aaPredicted RBP10.36□□□□□ -0.75
CCDC9-203ENST00000596938 TMEM164Q5U3C3 297 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 KCTD11Q693B1 232 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 CRTC3Q6UUV7 619 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 FAM151BQ6UXP7 276 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 JAMLQ86YT9 394 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 FAM71DQ8N9W8 422 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 LSM14AQ8ND56 463 aaKnown RBP10.36□□□□□ -0.75
CCDC9-203ENST00000596938 AGBL5Q8NDL9 886 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 DDHD1Q8NEL9 900 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 SLC35B2Q8TB61 432 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 ZNF514Q96K75 400 aaPredicted RBP10.36□□□□□ -0.75
CCDC9-203ENST00000596938 CCDC74BQ96LY2 380 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 FCRL3Q96P31 734 aaPredicted RBP10.36□□□□□ -0.75
CCDC9-203ENST00000596938 UBL7Q96S82 380 aaPredicted RBP10.36□□□□□ -0.75
CCDC9-203ENST00000596938 ZCCHC2Q9C0B9 1178 aaKnown RBP10.36□□□□□ -0.75
CCDC9-203ENST00000596938 SMOXQ9NWM0 555 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 PCDHGA3Q9Y5H0 932 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 ARL5AQ9Y689 179 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 CAPN6Q9Y6Q1 641 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 MYLKQ15746 1914 aa10.36□□□□□ -0.75
CCDC9-203ENST00000596938 COL27A1Q8IZC6 1860 aaPredicted RBP10.36□□□□□ -0.75
CCDC9-203ENST00000596938 ADAMTS20P59510 1910 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 KLHL33A6NCF5 533 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 LILRA5A6NI73 299 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 C9orf172C9J069 976 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 ARHGAP6O43182 974 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 PSMD3O43242 534 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 POP7O75817 140 aaKnown RBP10.35□□□□□ -0.75
CCDC9-203ENST00000596938 FGF3P11487 239 aaPredicted RBP10.35□□□□□ -0.75
CCDC9-203ENST00000596938 CCL4P13236 92 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 IDSP22304 550 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 CD82P27701 267 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 CSF2RBP32927 897 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 CSTF2P33240 577 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCDC9-203ENST00000596938 CA5AP35218 305 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 ETV5P41161 510 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms