RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 STAMQ92783 540 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 CD180Q99467 661 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 MROH8Q9H579 483 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 BICC1Q9H694 974 aaKnown RBP4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 SDF2L1Q9HCN8 221 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 SMARCAL1Q9NZC9 954 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 SLC9A2Q9UBY0 812 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 SLCO3A1Q9UIG8 710 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 IL16Q14005 1332 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 MROH7Q68CQ1 1323 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 ZNFX1Q9P2E3 1918 aaKnown RBP4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 CPED1A4D0V7 1026 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 HNRNPCL2B2RXH8 293 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 KLRF2D3W0D1 207 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 IRAK2O43187 625 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 KDM4BO94953 1096 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 CLDN14O95500 239 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 HSP90AA1P07900 732 aaKnown RBP4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 CYBAP13498 195 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 AMD1P17707 334 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 PAPOLAP51003 745 aaKnown RBP4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 YWHAZP63104 245 aaKnown RBP4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 ARL16Q0P5N6 197 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 NAA25Q14CX7 972 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 ESCO2Q56NI9 601 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 PSRC1Q6PGN9 363 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 ATF7IPQ6VMQ6 1270 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 MEX3BQ6ZN04 569 aaKnown RBP4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 C9orf139Q6ZV77 190 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 TUBA1AQ71U36 451 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 ANKRD33Q7Z3H0 272 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 CREB3L4Q8TEY5 395 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 SECTM1Q8WVN6 248 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 CD101Q93033 1021 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 TBC1D20Q96BZ9 403 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 HES6Q96HZ4 224 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 CSF3RQ99062 836 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 TUBA1CQ9BQE3 449 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 EPHX3Q9H6B9 360 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 EVA1AQ9H8M9 152 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 DDX4Q9NQI0 724 aaKnown RBP4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 ALKBH4Q9NXW9 302 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 HOXC10Q9NYD6 342 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 NRBP1Q9UHY1 535 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 MROH7-TTC4A0A0A0MT08 1334 aa4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 PDS5AQ29RF7 1337 aaKnown RBP4.87□□□□□ -1.63
HMGB3P5-201ENST00000428894 IGHV4OR15-8A0A075B7B6 117 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 PABPN1LA6NDY0 278 aaKnown RBP4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 CBY3A6NI87 242 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 PI4K2BG5E9Z4 385 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 ZIC3O60481 467 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 LMX1BO60663 402 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 CIAO1O76071 339 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 MTA2O94776 668 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 BAG3O95817 575 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 SP1P08047 785 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 PTPN2P17706 415 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 ANP32AP39687 249 aaKnown RBP4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 BLKP51451 505 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 ARL4CP56559 192 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 HSP90AB4PQ58FF6 505 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 FAM43BQ6ZT52 329 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 TBC1D26Q86UD7 250 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 PARP16Q8N5Y8 322 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 TRPV1Q8NER1 839 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 GJC3Q8NFK1 279 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 ERGIC1Q969X5 290 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 TRIM44Q96DX7 344 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 C12orf42Q96LP6 360 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 UBTD1Q9HAC8 227 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 NOX4Q9NPH5 578 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 ITM2CQ9NQX7 267 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 REV3LO60673 3130 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 RFX7Q2KHR2 1363 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 CDK5RAP2Q96SN8 1893 aa4.86□□□□□ -1.63
HMGB3P5-201ENST00000428894 HSPB2A8KAH6 182 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 WNT9BO14905 357 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 NDUFB4O95168 129 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 SLC2A4P14672 509 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 DGKAP23743 735 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 IL15P40933 162 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 NR1H2P55055 460 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 ECT2LQ008S8 904 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 MECOMQ03112 1051 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 TBL3Q12788 808 aaKnown RBP4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 COG2Q14746 738 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 HSPB2Q16082 182 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 TEX11Q8IYF3 940 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 LMNTD1Q8N9Z9 388 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 ZC3HAV1LQ96H79 300 aaKnown RBP4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 C3orf30Q96M34 536 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 GLT1D1Q96MS3 346 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 SPRY4Q9C004 299 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 CDC14AQ9UNH5 594 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 A3GALT2U3KPV4 340 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 ELP1O95163 1332 aa4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 PRRC2BQ5JSZ5 2229 aaKnown RBP4.85□□□□□ -1.63
HMGB3P5-201ENST00000428894 CHD9Q3L8U1 2897 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms