RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 CACNG4Q9UBN1 327 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 CFAP45Q9UL16 551 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 CITO14578 2027 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 HCFC1P51610 2035 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 ATMQ13315 3056 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 SPENQ96T58 3664 aaKnown RBP3.71□□□□□ -1.82
CNGA1-203ENST00000420489 SPTY2D1-AS1A0A0U1RR47 76 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 K7ENM7 598 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 SOCS6O14544 535 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 TOXO94900 526 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 THRAP10827 490 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 PSMA5P28066 241 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 GALNSP34059 522 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 DLSTP36957 453 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 HADHAP40939 763 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 PRPHP41219 470 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 RAD52P43351 418 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 CLCNKBP51801 687 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 GUCY2FP51841 1108 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 GPR85P60893 370 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 TSPY1Q01534 308 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 MRPL28Q13084 256 aaKnown RBP3.71□□□□□ -1.82
CNGA1-203ENST00000420489 ZNF234Q14588 700 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 ANKRD1Q15327 319 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 STX1AQ16623 288 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 CDKN3Q16667 212 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 SLC25A35Q3KQZ1 300 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 FAAH2Q6GMR7 532 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 CWC27Q6UX04 472 aaKnown RBP3.71□□□□□ -1.82
CNGA1-203ENST00000420489 SYNE3Q6ZMZ3 975 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 RBM43Q6ZSC3 357 aaKnown RBP3.71□□□□□ -1.82
CNGA1-203ENST00000420489 CUZD1Q86UP6 607 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 GKN2Q86XP6 184 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 CPXM2Q8N436 756 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 PARD3BQ8TEW8 1205 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 SLCO2A1Q92959 643 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 GTF3C6Q969F1 213 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 P2RY11Q96G91 374 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 RBM18Q96H35 190 aaKnown RBP3.71□□□□□ -1.82
CNGA1-203ENST00000420489 C1orf74Q96LT6 269 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 FER1L6-AS2Q96M78 137 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 LRFN5Q96NI6 719 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 ZNF577Q9BSK1 485 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 TRIM55Q9BYV6 548 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 TM6SF1Q9BZW5 370 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 KRT23Q9C075 422 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 NAT10Q9H0A0 1025 aaKnown RBP3.71□□□□□ -1.82
CNGA1-203ENST00000420489 SEC61A2Q9H9S3 476 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 EBF2Q9HAK2 575 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 FANCFQ9NPI8 374 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 ELOVL2Q9NXB9 296 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 PCSK1NQ9UHG2 260 aa3.71□□□□□ -1.82
CNGA1-203ENST00000420489 TRAV20A0A0B4J274 112 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 CCDC196A0A1B0GTZ2 297 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 hCG_1642624A0A1W2PR95 340 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 J3KRW8 73 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 TIPRLO75663 272 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 LARGE1O95461 756 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 ENO2P09104 434 aaPredicted RBP3.7□□□□□ -1.82
CNGA1-203ENST00000420489 TPM1P09493 284 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 H2AFXP16104 143 aaPredicted RBP3.7□□□□□ -1.82
CNGA1-203ENST00000420489 ITIH1P19827 911 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 HNRNPH2P55795 449 aaKnown RBP3.7□□□□□ -1.82
CNGA1-203ENST00000420489 NOP14P78316 857 aaKnown RBP3.7□□□□□ -1.82
CNGA1-203ENST00000420489 GOLGA8FQ08AF8 430 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 GOLGA8DPQ0D2H9 430 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 STK3Q13188 491 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 PIN1Q13526 163 aaPredicted RBP3.7□□□□□ -1.82
CNGA1-203ENST00000420489 ELOCQ15369 112 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 MUM1Q2TAK8 710 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 LRCH2Q5VUJ6 765 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 VASNQ6EMK4 673 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 NCEH1Q6PIU2 408 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 TEPPQ6URK8 271 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 USP37Q86T82 979 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 CEP57L1Q8IYX8 460 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 CCAR2Q8N163 923 aaKnown RBP3.7□□□□□ -1.82
CNGA1-203ENST00000420489 CBARPQ8N350 705 aaPredicted RBP3.7□□□□□ -1.82
CNGA1-203ENST00000420489 CCDC150Q8NCX0 1101 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 OR6B3Q8NGW1 331 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 SMPDL3BQ92485 455 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 ZNF75CPQ92670 426 aaPredicted RBP3.7□□□□□ -1.82
CNGA1-203ENST00000420489 INPP5DQ92835 1189 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 ACOX2Q99424 681 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 SPZ1Q9BXG8 430 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 TRIM9Q9C026 710 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 LSG1Q9H089 658 aaKnown RBP3.7□□□□□ -1.82
CNGA1-203ENST00000420489 EPS8L2Q9H6S3 715 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 MINDY3Q9H8M7 445 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 KCNJ16Q9NPI9 418 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 GIMAP2Q9UG22 337 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 UTP20O75691 2785 aaKnown RBP3.7□□□□□ -1.82
CNGA1-203ENST00000420489 NPEPPSL1A6NEC2 478 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 USP27XA6NNY8 438 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 FAM47E-STBD1D6RA91 191 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 DDX3XO00571 662 aaKnown RBP eCLIP3.7□□□□□ -1.82
CNGA1-203ENST00000420489 THAP12O43422 761 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 STK17BO94768 372 aa3.7□□□□□ -1.82
CNGA1-203ENST00000420489 PNMA6AP0CW24 399 aaPredicted RBP3.7□□□□□ -1.82
CNGA1-203ENST00000420489 HNRNPA2B1P22626 353 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms