RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C ULP1Q02724 621 aa9.17□□□□□ -0.94
LSP1YPL004C PSK2Q08217 1101 aa9.17□□□□□ -0.94
LSP1YPL004C ICL2Q12031 575 aa9.17□□□□□ -0.94
LSP1YPL004C CIT1P00890 479 aa9.16□□□□□ -0.94
LSP1YPL004C PHR1P05066 565 aaKnown RBP RIP-Chip data9.16□□□□□ -0.94not detected
LSP1YPL004C CBP3P21560 335 aa9.16□□□□□ -0.94
LSP1YPL004C SRP40P32583 406 aaPredicted RBP9.16□□□□□ -0.94
LSP1YPL004C UGA4P32837 571 aa9.16□□□□□ -0.94
LSP1YPL004C SHP1P34223 423 aa9.16□□□□□ -0.94
LSP1YPL004C RXT2P38255 430 aa9.16□□□□□ -0.94
LSP1YPL004C YHL017WP38745 532 aa9.16□□□□□ -0.94
LSP1YPL004C EPL1P43572 832 aa9.16□□□□□ -0.94
LSP1YPL004C DUS3Q06053 668 aaKnown RBP9.16□□□□□ -0.94
LSP1YPL004C YLR326WQ06170 240 aaKnown RBP9.16□□□□□ -0.94
LSP1YPL004C ISA1Q07821 250 aaPredicted RBP9.16□□□□□ -0.94
LSP1YPL004C MET7Q08645 548 aa9.16□□□□□ -0.94
LSP1YPL004C TY1B-AO13527 1196 aaKnown RBP9.15□□□□□ -0.94
LSP1YPL004C STI1P15705 589 aaKnown RBP RIP-Chip data9.15□□□□□ -0.94not detected
LSP1YPL004C MRPL32P25348 183 aa9.15□□□□□ -0.94
LSP1YPL004C PWP2P25635 923 aaKnown RBP9.15□□□□□ -0.94
LSP1YPL004C PAN5P38787 379 aa9.15□□□□□ -0.94
LSP1YPL004C NDT80P38830 627 aa9.15□□□□□ -0.94
LSP1YPL004C AIM21P40563 679 aa9.15□□□□□ -0.94
LSP1YPL004C GDE1Q02979 1223 aa9.15□□□□□ -0.94
LSP1YPL004C BUL2Q03758 920 aaKnown RBP9.15□□□□□ -0.94
LSP1YPL004C YGL138CP53122 345 aa9.14□□□□□ -0.95
LSP1YPL004C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.14□□□□□ -0.95not detected
LSP1YPL004C ERP3Q12403 225 aa9.14□□□□□ -0.95
LSP1YPL004C HCA4P20448 770 aaKnown RBP9.13□□□□□ -0.95
LSP1YPL004C TKL1P23254 680 aaKnown RBP9.13□□□□□ -0.95
LSP1YPL004C PAH1P32567 862 aa9.13□□□□□ -0.95
LSP1YPL004C SEC8P32855 1065 aa9.13□□□□□ -0.95
LSP1YPL004C DBP7P36120 742 aaKnown RBP9.13□□□□□ -0.95
LSP1YPL004C RPN10P38886 268 aaKnown RBP9.13□□□□□ -0.95
LSP1YPL004C CTF18P49956 741 aa9.13□□□□□ -0.95
LSP1YPL004C PTA1Q01329 785 aaPredicted RBP9.13□□□□□ -0.95
LSP1YPL004C PIB1Q06651 286 aa9.13□□□□□ -0.95
LSP1YPL004C RPL19AP0CX82 189 aaKnown RBP9.12□□□□□ -0.95
LSP1YPL004C RPL19BP0CX83 189 aaPredicted RBP9.12□□□□□ -0.95
LSP1YPL004C MAK11P20484 414 aaKnown RBP9.12□□□□□ -0.95
LSP1YPL004C MCM4P30665 933 aaKnown RBP9.12□□□□□ -0.95
LSP1YPL004C SLD5Q03406 294 aa9.12□□□□□ -0.95
LSP1YPL004C MSC6Q08818 692 aaKnown RBP9.12□□□□□ -0.95
LSP1YPL004C SUT2Q12286 268 aa9.12□□□□□ -0.95
LSP1YPL004C CEX1Q12453 761 aa9.12□□□□□ -0.95
LSP1YPL004C RLF2Q12495 606 aa9.12□□□□□ -0.95
LSP1YPL004C TAO3P40468 2376 aa9.12□□□□□ -0.95
LSP1YPL004C FKS1P38631 1876 aaKnown RBP9.11□□□□□ -0.95
LSP1YPL004C CDC6P09119 513 aa9.11□□□□□ -0.95
LSP1YPL004C YUR1P26725 428 aa9.11□□□□□ -0.95
LSP1YPL004C ASF1P32447 279 aa9.11□□□□□ -0.95
LSP1YPL004C REG2P38232 338 aa9.11□□□□□ -0.95
LSP1YPL004C BUD6P41697 788 aa9.11□□□□□ -0.95
LSP1YPL004C RET3P53600 189 aa9.11□□□□□ -0.95
LSP1YPL004C ELG1Q12050 791 aa9.11□□□□□ -0.95
LSP1YPL004C YPL150WQ12152 901 aa9.11□□□□□ -0.95
LSP1YPL004C SRO9P25567 434 aaKnown RBP9.1□□□□□ -0.95
LSP1YPL004C TFC4P33339 1025 aa9.1□□□□□ -0.95
LSP1YPL004C TTI1P36097 1038 aa9.1□□□□□ -0.95
LSP1YPL004C SUL1P38359 859 aa9.1□□□□□ -0.95
LSP1YPL004C VPS62P53285 467 aa9.1□□□□□ -0.95
LSP1YPL004C GIS4Q04233 774 aa9.1□□□□□ -0.95
LSP1YPL004C YMR321CQ04898 105 aa9.1□□□□□ -0.95
LSP1YPL004C ARP6Q12509 438 aa9.1□□□□□ -0.95
LSP1YPL004C VPS1P21576 704 aaKnown RBP9.09□□□□□ -0.95
LSP1YPL004C BCS1P32839 456 aa9.09□□□□□ -0.95
LSP1YPL004C TIM23P32897 222 aa9.09□□□□□ -0.95
LSP1YPL004C PAM1P37304 830 aaKnown RBP9.09□□□□□ -0.95
LSP1YPL004C VPS53P47061 822 aa9.09□□□□□ -0.95
LSP1YPL004C CTR1P49573 406 aa9.09□□□□□ -0.95
LSP1YPL004C YGL039WP53183 348 aaKnown RBP9.09□□□□□ -0.95
LSP1YPL004C BRE5P53741 515 aaKnown RBP9.09□□□□□ -0.95
LSP1YPL004C NAF1P53919 492 aaKnown RBP9.09□□□□□ -0.95
LSP1YPL004C VPS20Q04272 221 aa9.09□□□□□ -0.95
LSP1YPL004C WHI4Q07655 649 aaKnown RBP9.09□□□□□ -0.95
LSP1YPL004C OXR1Q08952 273 aa9.09□□□□□ -0.95
LSP1YPL004C TRM11Q12463 433 aa9.09□□□□□ -0.95
LSP1YPL004C RKM4Q12504 494 aa9.09□□□□□ -0.95
LSP1YPL004C DBP1P24784 617 aaKnown RBP9.08□□□□□ -0.96
LSP1YPL004C LDH1P38139 375 aa9.08□□□□□ -0.96
LSP1YPL004C AFG3P39925 761 aa9.08□□□□□ -0.96
LSP1YPL004C YJR107WP47145 328 aa9.08□□□□□ -0.96
LSP1YPL004C BNI5P53890 448 aaKnown RBP9.08□□□□□ -0.96
LSP1YPL004C ORC4P54791 529 aa9.08□□□□□ -0.96
LSP1YPL004C SMD2Q06217 110 aaKnown RBP9.08□□□□□ -0.96
LSP1YPL004C DCS2Q12123 353 aa9.08□□□□□ -0.96
LSP1YPL004C MDM20Q12387 796 aaKnown RBP9.08□□□□□ -0.96
LSP1YPL004C YOR131CQ12486 218 aa9.08□□□□□ -0.96
LSP1YPL004C HSP82P02829 709 aaKnown RBP9.07□□□□□ -0.96
LSP1YPL004C SES1P07284 462 aaKnown RBP9.07□□□□□ -0.96
LSP1YPL004C YGL015CP33199 130 aa9.07□□□□□ -0.96
LSP1YPL004C SAS3P34218 831 aa9.07□□□□□ -0.96
LSP1YPL004C MAC1P35192 417 aa9.07□□□□□ -0.96
LSP1YPL004C KSP1P38691 1029 aaKnown RBP9.07□□□□□ -0.96
LSP1YPL004C ENT3P47160 408 aa9.07□□□□□ -0.96
LSP1YPL004C SCS3P53012 380 aa9.07□□□□□ -0.96
LSP1YPL004C OYE2Q03558 400 aaKnown RBP9.07□□□□□ -0.96
LSP1YPL004C MOT1P32333 1867 aa9.06□□□□□ -0.96
LSP1YPL004C CPA2P03965 1118 aaKnown RBP9.06□□□□□ -0.96
LSP1YPL004C POX1P13711 748 aa9.06□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms