RNA–Protein interactions for RNA: YKL174C

TPO5, Transcript of Protein involved in excretion of putrescine and spermidine, yeast

Gene TPO5, Length 1,857 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPO5	YKL174C	TIF35	Q04067	274 aa	Known RBP	4.62	□□□□□ -1.67
TPO5	YKL174C	NSE3	Q05541	303 aa		4.62	□□□□□ -1.67
TPO5	YKL174C	YPL066W	Q12194	479 aa		4.62	□□□□□ -1.67
TPO5	YKL174C	TY1A-NL1	Q12391	440 aa	Known RBP	4.62	□□□□□ -1.67
TPO5	YKL174C	ABD1	P32783	436 aa	Predicted RBP	4.61	□□□□□ -1.67
TPO5	YKL174C	KIP3	P53086	805 aa	Known RBP	4.61	□□□□□ -1.67
TPO5	YKL174C	YGR045C	P53229	120 aa		4.61	□□□□□ -1.67
TPO5	YKL174C	NCE103	P53615	221 aa		4.61	□□□□□ -1.67
TPO5	YKL174C	RKM2	Q03942	479 aa		4.61	□□□□□ -1.67
TPO5	YKL174C	YLR225C	Q05948	407 aa	Known RBP	4.61	□□□□□ -1.67
TPO5	YKL174C	TDA5	Q06417	326 aa	Known RBP	4.61	□□□□□ -1.67
TPO5	YKL174C	MOT2	P34909	587 aa	Known RBP	4.6	□□□□□ -1.67
TPO5	YKL174C	MAE1	P36013	669 aa	Known RBP	4.6	□□□□□ -1.67
TPO5	YKL174C	BOI2	P39969	1040 aa		4.6	□□□□□ -1.67
TPO5	YKL174C	YJL049W	P47048	450 aa		4.6	□□□□□ -1.67
TPO5	YKL174C	DSE4	P53753	1117 aa		4.6	□□□□□ -1.67
TPO5	YKL174C	BDF2	Q07442	638 aa		4.6	□□□□□ -1.67
TPO5	YKL174C	AGP1	P25376	633 aa		4.6	□□□□□ -1.67
TPO5	YKL174C	SYP1	P25623	870 aa	Known RBP	4.6	□□□□□ -1.67
TPO5	YKL174C	YNR063W	P53749	607 aa		4.6	□□□□□ -1.67
TPO5	YKL174C	FAR11	P53917	953 aa		4.6	□□□□□ -1.67
TPO5	YKL174C	AOS1	Q06624	347 aa		4.6	□□□□□ -1.67
TPO5	YKL174C	AI1	P03875	834 aa		4.59	□□□□□ -1.67
TPO5	YKL174C	DBP5	P20449	482 aa	Known RBP	4.59	□□□□□ -1.67
TPO5	YKL174C	ALG3	P38179	458 aa		4.59	□□□□□ -1.67
TPO5	YKL174C	YAR028W	P39548	234 aa		4.59	□□□□□ -1.67
TPO5	YKL174C	MPH1	P40562	993 aa		4.59	□□□□□ -1.67
TPO5	YKL174C	BUD9	P53226	547 aa		4.59	□□□□□ -1.67
TPO5	YKL174C	YMR074C	Q04773	145 aa		4.59	□□□□□ -1.67
TPO5	YKL174C	RAD4	P14736	754 aa		4.58	□□□□□ -1.68
TPO5	YKL174C	MDJ1	P35191	511 aa		4.58	□□□□□ -1.68
TPO5	YKL174C	VBA5	P36172	582 aa		4.58	□□□□□ -1.68
TPO5	YKL174C	YHR020W	P38708	688 aa	Known RBP	4.58	□□□□□ -1.68
TPO5	YKL174C	BUD6	P41697	788 aa		4.58	□□□□□ -1.68
TPO5	YKL174C	CNN1	P43618	361 aa		4.58	□□□□□ -1.68
TPO5	YKL174C	HUL5	P53119	910 aa		4.58	□□□□□ -1.68
TPO5	YKL174C	YNR014W	P53719	212 aa		4.58	□□□□□ -1.68
TPO5	YKL174C	ELA1	P53861	379 aa	Predicted RBP	4.58	□□□□□ -1.68
TPO5	YKL174C	TDA6	Q06466	467 aa		4.58	□□□□□ -1.68
TPO5	YKL174C	CIT2	P08679	460 aa		4.58	□□□□□ -1.68
TPO5	YKL174C	INO1	P11986	533 aa		4.58	□□□□□ -1.68
TPO5	YKL174C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	RIP-Chip
TPO5	YKL174C	RPN4	Q03465	531 aa		4.58	□□□□□ -1.68
TPO5	YKL174C	YOR223W	Q12015	292 aa		4.58	□□□□□ -1.68
TPO5	YKL174C	SBA1	P28707	216 aa	Known RBP	4.57	□□□□□ -1.68
TPO5	YKL174C	SRP40	P32583	406 aa	Predicted RBP	4.57	□□□□□ -1.68
TPO5	YKL174C	YBR184W	P38299	523 aa		4.57	□□□□□ -1.68
TPO5	YKL174C	MCX1	P38323	520 aa	Predicted RBP	4.57	□□□□□ -1.68
TPO5	YKL174C	PFD1	P46988	109 aa		4.57	□□□□□ -1.68
TPO5	YKL174C	NAN1	Q02931	896 aa	Known RBP	4.57	□□□□□ -1.68
TPO5	YKL174C	DOT1	Q04089	582 aa	Known RBP	4.57	□□□□□ -1.68
TPO5	YKL174C	SHE9	Q04172	456 aa		4.57	□□□□□ -1.68
TPO5	YKL174C	SPO20	Q04359	397 aa		4.57	□□□□□ -1.68
TPO5	YKL174C	FPR4	Q06205	392 aa	Predicted RBP	4.57	□□□□□ -1.68
TPO5	YKL174C	PPM2	Q08282	695 aa		4.57	□□□□□ -1.68
TPO5	YKL174C	THI72	Q08579	599 aa		4.57	□□□□□ -1.68
TPO5	YKL174C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
TPO5	YKL174C	MLS1	P30952	554 aa		4.56	□□□□□ -1.68
TPO5	YKL174C	YKL091C	P33324	310 aa	Known RBP	4.56	□□□□□ -1.68
TPO5	YKL174C	CDC53	Q12018	815 aa	Known RBP	4.56	□□□□□ -1.68
TPO5	YKL174C	YLL054C	Q12244	843 aa		4.56	□□□□□ -1.68
TPO5	YKL174C	PTC5	Q12511	572 aa		4.56	□□□□□ -1.68
TPO5	YKL174C	AI3	P03877	415 aa		4.56	□□□□□ -1.68
TPO5	YKL174C	YCK2	P23292	546 aa	Known RBP	4.56	□□□□□ -1.68
TPO5	YKL174C	GPT2	P36148	743 aa		4.56	□□□□□ -1.68
TPO5	YKL174C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
TPO5	YKL174C	SIP5	P40210	489 aa	Known RBP	4.56	□□□□□ -1.68
TPO5	YKL174C	MSH4	P40965	878 aa	Predicted RBP	4.56	□□□□□ -1.68
TPO5	YKL174C	RSA3	Q05942	220 aa	Known RBP	4.56	□□□□□ -1.68
TPO5	YKL174C	AVO1	Q08236	1176 aa		4.56	□□□□□ -1.68
TPO5	YKL174C	SFA1	P32771	386 aa		4.55	□□□□□ -1.68
TPO5	YKL174C	QNS1	P38795	714 aa	Known RBP	4.55	□□□□□ -1.68
TPO5	YKL174C	MBP1	P39678	833 aa		4.55	□□□□□ -1.68
TPO5	YKL174C	YGL176C	P46945	554 aa		4.55	□□□□□ -1.68
TPO5	YKL174C	PRY1	P47032	299 aa		4.55	□□□□□ -1.68
TPO5	YKL174C	YDR215C	Q12240	137 aa		4.55	□□□□□ -1.68
TPO5	YKL174C	RKM4	Q12504	494 aa		4.55	□□□□□ -1.68
TPO5	YKL174C	RET1	P22276	1149 aa	Known RBP	4.54	□□□□□ -1.68
TPO5	YKL174C	MCM7	P38132	845 aa		4.54	□□□□□ -1.68
TPO5	YKL174C	RGD1	P38339	666 aa		4.54	□□□□□ -1.68
TPO5	YKL174C	NMD3	P38861	518 aa	Known RBP	4.54	□□□□□ -1.68
TPO5	YKL174C	SLN1	P39928	1220 aa	Predicted RBP	4.54	□□□□□ -1.68
TPO5	YKL174C	FMP25	Q08023	583 aa		4.54	□□□□□ -1.68
TPO5	YKL174C	YER152C	P10356	443 aa		4.54	□□□□□ -1.68
TPO5	YKL174C	RPL8B	P29453	256 aa	Known RBP	4.54	□□□□□ -1.68
TPO5	YKL174C	MRP8	P35719	219 aa		4.54	□□□□□ -1.68
TPO5	YKL174C	IRR1	P40541	1150 aa		4.54	□□□□□ -1.68
TPO5	YKL174C	TIM54	P47045	478 aa		4.54	□□□□□ -1.68
TPO5	YKL174C	EAR1	Q03212	550 aa		4.54	□□□□□ -1.68
TPO5	YKL174C	YLR257W	Q06146	321 aa	Known RBP	4.54	□□□□□ -1.68
TPO5	YKL174C	LAP2	Q10740	671 aa		4.54	□□□□□ -1.68
TPO5	YKL174C	KIP1	P28742	1111 aa		4.53	□□□□□ -1.68
TPO5	YKL174C	SMY2	P32909	740 aa	Known RBP	4.53	□□□□□ -1.68
TPO5	YKL174C	YKL107W	P34251	309 aa		4.53	□□□□□ -1.68
TPO5	YKL174C	ICP55	P40051	511 aa		4.53	□□□□□ -1.68
TPO5	YKL174C	VPS53	P47061	822 aa		4.53	□□□□□ -1.68
TPO5	YKL174C	HNT2	P49775	206 aa		4.53	□□□□□ -1.68
TPO5	YKL174C	ALT1	P52893	592 aa		4.53	□□□□□ -1.68
TPO5	YKL174C	RNH70	P53331	553 aa		4.53	□□□□□ -1.68
TPO5	YKL174C	NSG2	P53898	299 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms