RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C PET112P33893 541 aa3.81□□□□□ -1.8
SPT4YGR063C VPS35P34110 944 aa3.81□□□□□ -1.8
SPT4YGR063C OSH3P38713 996 aaKnown RBP3.81□□□□□ -1.8
SPT4YGR063C RRM3P38766 723 aa3.81□□□□□ -1.8
SPT4YGR063C MET10P39692 1035 aa3.81□□□□□ -1.8
SPT4YGR063C SDS3P40505 327 aa3.81□□□□□ -1.8
SPT4YGR063C VNX1P42839 908 aa3.81□□□□□ -1.8
SPT4YGR063C STB1P42845 420 aa3.81□□□□□ -1.8
SPT4YGR063C LAM5P43560 674 aa3.81□□□□□ -1.8
SPT4YGR063C GYP7P48365 746 aa3.81□□□□□ -1.8
SPT4YGR063C MSN5P52918 1224 aa3.81□□□□□ -1.8
SPT4YGR063C HXT17P53631 564 aa3.81□□□□□ -1.8
SPT4YGR063C VPS75P53853 264 aa3.81□□□□□ -1.8
SPT4YGR063C BET4Q00618 327 aa3.81□□□□□ -1.8
SPT4YGR063C YKR005CQ02203 525 aa3.81□□□□□ -1.8
SPT4YGR063C YLR177WQ06251 628 aa3.81□□□□□ -1.8
SPT4YGR063C MMR1Q06324 491 aa3.81□□□□□ -1.8
SPT4YGR063C RRP9Q06506 573 aaKnown RBP3.81□□□□□ -1.8
SPT4YGR063C VAM6Q07468 1049 aa3.81□□□□□ -1.8
SPT4YGR063C NOP6Q07623 225 aaKnown RBP3.81□□□□□ -1.8
SPT4YGR063C RTT109Q07794 436 aa3.81□□□□□ -1.8
SPT4YGR063C BUD7Q08754 746 aa3.81□□□□□ -1.8
SPT4YGR063C SGT2Q12118 346 aaKnown RBP3.81□□□□□ -1.8
SPT4YGR063C OSH2Q12451 1283 aa3.81□□□□□ -1.8
SPT4YGR063C BCK1Q01389 1478 aa3.8□□□□□ -1.8
SPT4YGR063C VAS1P07806 1104 aaKnown RBP3.8□□□□□ -1.8
SPT4YGR063C ADH4P10127 382 aa3.8□□□□□ -1.8
SPT4YGR063C ARG1P22768 420 aa3.8□□□□□ -1.8
SPT4YGR063C ITR2P30606 609 aa3.8□□□□□ -1.8
SPT4YGR063C ASF1P32447 279 aa3.8□□□□□ -1.8
SPT4YGR063C CNS1P33313 385 aa3.8□□□□□ -1.8
SPT4YGR063C YKL091CP33324 310 aaKnown RBP3.8□□□□□ -1.8
SPT4YGR063C NUP120P35729 1037 aa3.8□□□□□ -1.8
SPT4YGR063C YLF2P38746 405 aa3.8□□□□□ -1.8
SPT4YGR063C ETP1P38748 585 aaKnown RBP3.8□□□□□ -1.8
SPT4YGR063C SSZ1P38788 538 aaKnown RBP3.8□□□□□ -1.8
SPT4YGR063C CCC2P38995 1004 aa3.8□□□□□ -1.8
SPT4YGR063C ILV3P39522 585 aaKnown RBP3.8□□□□□ -1.8
SPT4YGR063C YHB1P39676 399 aaKnown RBP3.8□□□□□ -1.8
SPT4YGR063C MAD1P40957 749 aa3.8□□□□□ -1.8
SPT4YGR063C MIC19P43594 170 aa3.8□□□□□ -1.8
SPT4YGR063C CKB1P43639 278 aa3.8□□□□□ -1.8
SPT4YGR063C YPT11P48559 417 aa3.8□□□□□ -1.8
SPT4YGR063C RBL2P48606 106 aaKnown RBP3.8□□□□□ -1.8
SPT4YGR063C CAF130P53280 1122 aaPredicted RBP3.8□□□□□ -1.8
SPT4YGR063C TFB2Q02939 513 aa3.8□□□□□ -1.8
SPT4YGR063C WAR1Q03631 944 aa3.8□□□□□ -1.8
SPT4YGR063C SPC24Q04477 213 aa3.8□□□□□ -1.8
SPT4YGR063C ITT1Q04638 464 aa3.8□□□□□ -1.8
SPT4YGR063C SPP382Q06411 708 aaPredicted RBP3.8□□□□□ -1.8
SPT4YGR063C MAG2Q06436 670 aaKnown RBP3.8□□□□□ -1.8
SPT4YGR063C YLH47Q06493 454 aa3.8□□□□□ -1.8
SPT4YGR063C YPR172WQ06608 200 aa3.8□□□□□ -1.8
SPT4YGR063C SDH5Q08230 162 aa3.8□□□□□ -1.8
SPT4YGR063C SAM3Q08986 587 aa3.8□□□□□ -1.8
SPT4YGR063C HMI1Q12039 706 aa3.8□□□□□ -1.8
SPT4YGR063C NUR1Q12066 484 aa3.8□□□□□ -1.8
SPT4YGR063C IES3Q12345 250 aa3.8□□□□□ -1.8
SPT4YGR063C BUD3P25558 1636 aa3.8□□□□□ -1.8
SPT4YGR063C UTP10P42945 1769 aaKnown RBP3.79□□□□□ -1.8
SPT4YGR063C RSF2P46974 1380 aa3.79□□□□□ -1.8
SPT4YGR063C REP1P03871 373 aa3.79□□□□□ -1.8
SPT4YGR063C PET494P07390 489 aaPredicted RBP3.79□□□□□ -1.8
SPT4YGR063C RPB2P08518 1224 aaKnown RBP3.79□□□□□ -1.8
SPT4YGR063C HMG1P12683 1054 aa3.79□□□□□ -1.8
SPT4YGR063C SEC23P15303 768 aaKnown RBP3.79□□□□□ -1.8
SPT4YGR063C PHO13P19881 312 aa3.79□□□□□ -1.8
SPT4YGR063C MSM1P22438 575 aa3.79□□□□□ -1.8
SPT4YGR063C GSY2P27472 705 aa3.79□□□□□ -1.8
SPT4YGR063C RPC19P28000 142 aaKnown RBP3.79□□□□□ -1.8
SPT4YGR063C NIP1P32497 812 aaKnown RBP3.79□□□□□ -1.8
SPT4YGR063C RPC34P32910 317 aa3.79□□□□□ -1.8
SPT4YGR063C DUR3P33413 735 aa3.79□□□□□ -1.8
SPT4YGR063C LOS1P33418 1100 aaPredicted RBP3.79□□□□□ -1.8
SPT4YGR063C COY1P34237 679 aa3.79□□□□□ -1.8
SPT4YGR063C CSE4P36012 229 aa3.79□□□□□ -1.8
SPT4YGR063C DBP7P36120 742 aaKnown RBP3.79□□□□□ -1.8
SPT4YGR063C PXL1P36166 706 aa3.79□□□□□ -1.8
SPT4YGR063C RFT1P38206 574 aaPredicted RBP3.79□□□□□ -1.8
SPT4YGR063C EFM2P38347 419 aa3.79□□□□□ -1.8
SPT4YGR063C SAK1P38990 1142 aa3.79□□□□□ -1.8
SPT4YGR063C MET18P40469 1032 aa3.79□□□□□ -1.8
SPT4YGR063C AIM21P40563 679 aa3.79□□□□□ -1.8
SPT4YGR063C STR2P47164 639 aa3.79□□□□□ -1.8
SPT4YGR063C RSM28Q03430 361 aa3.79□□□□□ -1.8
SPT4YGR063C TAF8Q03750 510 aa3.79□□□□□ -1.8
SPT4YGR063C YMR111CQ04461 462 aaPredicted RBP3.79□□□□□ -1.8
SPT4YGR063C FUS2Q05670 677 aa3.79□□□□□ -1.8
SPT4YGR063C GPN2Q08726 347 aaPredicted RBP3.79□□□□□ -1.8
SPT4YGR063C APL4Q12028 832 aa3.79□□□□□ -1.8
SPT4YGR063C VIK1Q12045 647 aa3.79□□□□□ -1.8
SPT4YGR063C YPL150WQ12152 901 aa3.79□□□□□ -1.8
SPT4YGR063C MSH5Q12175 901 aa3.79□□□□□ -1.8
SPT4YGR063C WSC3Q12215 556 aa3.79□□□□□ -1.8
SPT4YGR063C OCA6Q12454 224 aa3.79□□□□□ -1.8
SPT4YGR063C RMP1Q12530 201 aa3.79□□□□□ -1.8
SPT4YGR063C RAD1P06777 1100 aa3.78□□□□□ -1.8
SPT4YGR063C RPS19AP07280 144 aaKnown RBP3.78□□□□□ -1.8
SPT4YGR063C RPS19BP07281 144 aaPredicted RBP3.78□□□□□ -1.8
SPT4YGR063C GPA1P08539 472 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms