RNA–Protein interactions for RNA: YER162C

RAD4, Transcript of Protein that recognizes and binds damaged DNA (with Rad23p) during NER, yeast

Gene RAD4, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD4	YER162C	YNL193W	P53870	558 aa		4.21	□□□□□ -1.73
RAD4	YER162C	RRI2	Q12348	645 aa		4.21	□□□□□ -1.73
RAD4	YER162C	SEC20	P28791	383 aa		4.21	□□□□□ -1.74
RAD4	YER162C	GRX7	P38068	203 aa		4.21	□□□□□ -1.74
RAD4	YER162C	TOR2	P32600	2474 aa	Known RBP	4.2	□□□□□ -1.74
RAD4	YER162C	RPP0	P05317	312 aa	Known RBP	4.2	□□□□□ -1.74
RAD4	YER162C	MAK16	P10962	306 aa	Predicted RBP	4.2	□□□□□ -1.74
RAD4	YER162C	POL3	P15436	1097 aa		4.2	□□□□□ -1.74
RAD4	YER162C	SRM1	P21827	482 aa		4.2	□□□□□ -1.74
RAD4	YER162C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
RAD4	YER162C	SRP40	P32583	406 aa	Predicted RBP	4.2	□□□□□ -1.74
RAD4	YER162C	UTR4	P32626	227 aa		4.2	□□□□□ -1.74
RAD4	YER162C	STM1	P39015	273 aa	Known RBP	4.2	□□□□□ -1.74
RAD4	YER162C	NUP42	P49686	430 aa	Known RBP	4.2	□□□□□ -1.74
RAD4	YER162C	DAK1	P54838	584 aa	Known RBP	4.2	□□□□□ -1.74
RAD4	YER162C	BUL2	Q03758	920 aa	Known RBP	4.2	□□□□□ -1.74
RAD4	YER162C	PSK2	Q08217	1101 aa		4.2	□□□□□ -1.74
RAD4	YER162C	AI2	P03876	854 aa		4.2	□□□□□ -1.74
RAD4	YER162C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
RAD4	YER162C	POX1	P13711	748 aa		4.2	□□□□□ -1.74
RAD4	YER162C	OPI1	P21957	404 aa		4.2	□□□□□ -1.74
RAD4	YER162C	BIO2	P32451	375 aa		4.2	□□□□□ -1.74
RAD4	YER162C	GPT2	P36148	743 aa		4.2	□□□□□ -1.74
RAD4	YER162C	PES4	P39684	611 aa		4.2	□□□□□ -1.74
RAD4	YER162C	VPS53	P47061	822 aa		4.2	□□□□□ -1.74
RAD4	YER162C	ALG12	P53730	551 aa		4.2	□□□□□ -1.74
RAD4	YER162C	YDL144C	Q07589	356 aa		4.2	□□□□□ -1.74
RAD4	YER162C	ISA1	Q07821	250 aa	Predicted RBP	4.2	□□□□□ -1.74
RAD4	YER162C	SSF2	Q12153	453 aa	Predicted RBP	4.2	□□□□□ -1.74
RAD4	YER162C	ERP4	Q12450	207 aa		4.2	□□□□□ -1.74
RAD4	YER162C	RTP1	Q12751	981 aa		4.2	□□□□□ -1.74
RAD4	YER162C	TIF1	P10081	395 aa	Known RBP	4.19	□□□□□ -1.74
RAD4	YER162C	IDI1	P15496	288 aa		4.19	□□□□□ -1.74
RAD4	YER162C	YUR1	P26725	428 aa		4.19	□□□□□ -1.74
RAD4	YER162C	OYE3	P41816	400 aa	Predicted RBP	4.19	□□□□□ -1.74
RAD4	YER162C	ESF2	P53743	316 aa	Known RBP	4.19	□□□□□ -1.74
RAD4	YER162C	POB3	Q04636	552 aa	Known RBP	4.19	□□□□□ -1.74
RAD4	YER162C	SVF1	Q05515	481 aa		4.19	□□□□□ -1.74
RAD4	YER162C	RPN7	Q06103	429 aa	Known RBP	4.19	□□□□□ -1.74
RAD4	YER162C	MSC6	Q08818	692 aa	Known RBP	4.19	□□□□□ -1.74
RAD4	YER162C	YPL260W	Q08977	551 aa		4.19	□□□□□ -1.74
RAD4	YER162C	RAD18	P10862	487 aa		4.19	□□□□□ -1.74
RAD4	YER162C	MCM4	P30665	933 aa	Known RBP	4.19	□□□□□ -1.74
RAD4	YER162C	TGL1	P34163	548 aa		4.19	□□□□□ -1.74
RAD4	YER162C	IOC3	P43596	787 aa		4.19	□□□□□ -1.74
RAD4	YER162C	YGL081W	P53156	320 aa		4.19	□□□□□ -1.74
RAD4	YER162C	JIP5	Q06214	492 aa	Predicted RBP	4.19	□□□□□ -1.74
RAD4	YER162C	SNA3	P14359	133 aa		4.18	□□□□□ -1.74
RAD4	YER162C	SEC8	P32855	1065 aa		4.18	□□□□□ -1.74
RAD4	YER162C	YKL091C	P33324	310 aa	Known RBP	4.18	□□□□□ -1.74
RAD4	YER162C	TTI1	P36097	1038 aa		4.18	□□□□□ -1.74
RAD4	YER162C	VID30	P53076	958 aa		4.18	□□□□□ -1.74
RAD4	YER162C	YGR035C	P53222	116 aa		4.18	□□□□□ -1.74
RAD4	YER162C	CEF1	Q03654	590 aa	Predicted RBP	4.18	□□□□□ -1.74
RAD4	YER162C	CSI1	Q04368	295 aa		4.18	□□□□□ -1.74
RAD4	YER162C	PLP2	Q12017	286 aa		4.18	□□□□□ -1.74
RAD4	YER162C	NKP1	Q12493	238 aa		4.18	□□□□□ -1.74
RAD4	YER162C	MOT1	P32333	1867 aa		4.18	□□□□□ -1.74
RAD4	YER162C	DBP7	P36120	742 aa	Known RBP	4.18	□□□□□ -1.74
RAD4	YER162C	RSM7	P47150	247 aa		4.18	□□□□□ -1.74
RAD4	YER162C	ART5	P53244	586 aa	Known RBP	4.18	□□□□□ -1.74
RAD4	YER162C	SPH1	Q06160	661 aa		4.18	□□□□□ -1.74
RAD4	YER162C	GUD1	Q07729	489 aa		4.18	□□□□□ -1.74
RAD4	YER162C	RAD59	Q12223	238 aa		4.18	□□□□□ -1.74
RAD4	YER162C	TRM11	Q12463	433 aa		4.18	□□□□□ -1.74
RAD4	YER162C	FAB1	P34756	2278 aa		4.17	□□□□□ -1.74
RAD4	YER162C	PWP2	P25635	923 aa	Known RBP	4.17	□□□□□ -1.74
RAD4	YER162C	RPN12	P32496	274 aa		4.17	□□□□□ -1.74
RAD4	YER162C	TFC4	P33339	1025 aa		4.17	□□□□□ -1.74
RAD4	YER162C	YML083C	Q04526	418 aa		4.17	□□□□□ -1.74
RAD4	YER162C	CSC1	Q06538	782 aa		4.17	□□□□□ -1.74
RAD4	YER162C	ERP3	Q12403	225 aa		4.17	□□□□□ -1.74
RAD4	YER162C	CIT2	P08679	460 aa		4.16	□□□□□ -1.74
RAD4	YER162C	SWI6	P09959	803 aa		4.16	□□□□□ -1.74
RAD4	YER162C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
RAD4	YER162C	SYN8	P31377	255 aa		4.16	□□□□□ -1.74
RAD4	YER162C	GCD7	P32502	381 aa	Predicted RBP	4.16	□□□□□ -1.74
RAD4	YER162C	RDH54	P38086	958 aa		4.16	□□□□□ -1.74
RAD4	YER162C	POL32	P47110	350 aa		4.16	□□□□□ -1.74
RAD4	YER162C	SCS3	P53012	380 aa		4.16	□□□□□ -1.74
RAD4	YER162C	SLD5	Q03406	294 aa		4.16	□□□□□ -1.74
RAD4	YER162C	TY4B-P	A0A0B7P3V8	1104 aa		4.16	□□□□□ -1.74
RAD4	YER162C	SPT2	P06843	333 aa	Predicted RBP	4.16	□□□□□ -1.74
RAD4	YER162C	TRX2	P22803	104 aa	Known RBP	4.16	□□□□□ -1.74
RAD4	YER162C	SLA1	P32790	1244 aa		4.16	□□□□□ -1.74
RAD4	YER162C	SEC6	P32844	805 aa		4.16	□□□□□ -1.74
RAD4	YER162C	PHO88	P38264	188 aa	Predicted RBP	4.16	□□□□□ -1.74
RAD4	YER162C	STB5	P38699	743 aa		4.16	□□□□□ -1.74
RAD4	YER162C	YNL034W	P53963	612 aa		4.16	□□□□□ -1.74
RAD4	YER162C	YNL018C	P53976	612 aa		4.16	□□□□□ -1.74
RAD4	YER162C	YGR161W-C	Q3E744	92 aa		4.16	□□□□□ -1.74
RAD4	YER162C	TY4A-H	Q6Q5P6	413 aa		4.16	□□□□□ -1.74
RAD4	YER162C	DUR3	P33413	735 aa		4.15	□□□□□ -1.74
RAD4	YER162C	SPO74	P45819	413 aa		4.15	□□□□□ -1.74
RAD4	YER162C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
RAD4	YER162C	SYH1	Q02875	849 aa	Known RBP	4.15	□□□□□ -1.74
RAD4	YER162C	RMD1	Q03441	430 aa		4.15	□□□□□ -1.74
RAD4	YER162C	SKY1	Q03656	742 aa		4.15	□□□□□ -1.74
RAD4	YER162C	YMR321C	Q04898	105 aa		4.15	□□□□□ -1.74
RAD4	YER162C	RAD61	Q99359	647 aa		4.15	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 103.1 ms