RNA–Protein interactions for RNA: YDR320C

SWA2, Transcript of Auxilin-like protein involved in vesicular transport, yeastyeast

Gene SWA2, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWA2YDR320C WHI5Q12416 295 aa3.03□□□□□ -1.92
SWA2YDR320C LSO1Q3E827 93 aa3.03□□□□□ -1.92
SWA2YDR320C HTS1P07263 546 aaKnown RBP3.02□□□□□ -1.93
SWA2YDR320C SEC20P28791 383 aa3.02□□□□□ -1.93
SWA2YDR320C RIM11P38615 370 aa3.02□□□□□ -1.93
SWA2YDR320C BUD6P41697 788 aa3.02□□□□□ -1.93
SWA2YDR320C MRPL22P53881 309 aa3.02□□□□□ -1.93
SWA2YDR320C MEC3Q02574 474 aa3.02□□□□□ -1.93
SWA2YDR320C YBL113CQ7M4S9 792 aa3.02□□□□□ -1.93
SWA2YDR320C DAL5P15365 543 aa3.02□□□□□ -1.93
SWA2YDR320C RPB10P22139 70 aa3.02□□□□□ -1.93
SWA2YDR320C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
SWA2YDR320C RRP14P36080 434 aaKnown RBP3.02□□□□□ -1.93
SWA2YDR320C ERP5P38819 212 aa3.02□□□□□ -1.93
SWA2YDR320C RPT2P40327 437 aaKnown RBP3.02□□□□□ -1.93
SWA2YDR320C DNM1P54861 757 aa3.02□□□□□ -1.93
SWA2YDR320C EAR1Q03212 550 aa3.02□□□□□ -1.93
SWA2YDR320C SEC8P32855 1065 aa3.01□□□□□ -1.93
SWA2YDR320C NFU1P32860 256 aa3.01□□□□□ -1.93
SWA2YDR320C RPS0AP32905 252 aaKnown RBP3.01□□□□□ -1.93
SWA2YDR320C EBP2P36049 427 aaKnown RBP3.01□□□□□ -1.93
SWA2YDR320C POL32P47110 350 aa3.01□□□□□ -1.93
SWA2YDR320C COBP00163 385 aa3□□□□□ -1.93
SWA2YDR320C PRO1P32264 428 aa3□□□□□ -1.93
SWA2YDR320C PPG1P32838 368 aa3□□□□□ -1.93
SWA2YDR320C SMY2P32909 740 aaKnown RBP3□□□□□ -1.93
SWA2YDR320C MDJ2P42834 146 aa3□□□□□ -1.93
SWA2YDR320C RPN4Q03465 531 aa3□□□□□ -1.93
SWA2YDR320C CMR1Q12510 522 aaKnown RBP3□□□□□ -1.93
SWA2YDR320C NPR1P22211 790 aa3□□□□□ -1.93
SWA2YDR320C NFS1P25374 497 aa3□□□□□ -1.93
SWA2YDR320C ABZ1P37254 787 aaPredicted RBP3□□□□□ -1.93
SWA2YDR320C ERP2P39704 215 aa3□□□□□ -1.93
SWA2YDR320C NOP2P40991 618 aaKnown RBP3□□□□□ -1.93
SWA2YDR320C YJR107WP47145 328 aa3□□□□□ -1.93
SWA2YDR320C OYE2Q03558 400 aaKnown RBP3□□□□□ -1.93
SWA2YDR320C TMA64Q04600 565 aaKnown RBP3□□□□□ -1.93
SWA2YDR320C PNP1Q05788 311 aa3□□□□□ -1.93
SWA2YDR320C ARL1P38116 183 aaKnown RBP2.99□□□□□ -1.93
SWA2YDR320C YHL050CP38721 697 aa2.99□□□□□ -1.93
SWA2YDR320C YHR219WP38900 624 aa2.99□□□□□ -1.93
SWA2YDR320C CLU1Q03690 1277 aaKnown RBP2.99□□□□□ -1.93
SWA2YDR320C ECM16Q04217 1267 aaKnown RBP2.99□□□□□ -1.93
SWA2YDR320C SSF2Q12153 453 aaPredicted RBP2.99□□□□□ -1.93
SWA2YDR320C TAF13P11747 167 aa2.98□□□□□ -1.93
SWA2YDR320C FUI1P38196 639 aa2.98□□□□□ -1.93
SWA2YDR320C PPX1P38698 397 aa2.98□□□□□ -1.93
SWA2YDR320C UBP12P39538 1254 aa2.98□□□□□ -1.93
SWA2YDR320C VAC8P39968 578 aa2.98□□□□□ -1.93
SWA2YDR320C SAP155P43612 1002 aa2.98□□□□□ -1.93
SWA2YDR320C UTP22P53254 1237 aaPredicted RBP2.98□□□□□ -1.93
SWA2YDR320C JIP5Q06214 492 aaPredicted RBP2.98□□□□□ -1.93
SWA2YDR320C SRP40P32583 406 aaPredicted RBP2.98□□□□□ -1.93
SWA2YDR320C NNK1P36003 928 aa2.98□□□□□ -1.93
SWA2YDR320C REI1P38344 393 aaPredicted RBP2.98□□□□□ -1.93
SWA2YDR320C GLO3P38682 493 aaKnown RBP2.98□□□□□ -1.93
SWA2YDR320C VPS27P40343 622 aaKnown RBP2.98□□□□□ -1.93
SWA2YDR320C NSE3Q05541 303 aa2.98□□□□□ -1.93
SWA2YDR320C COG4Q06096 861 aa2.98□□□□□ -1.93
SWA2YDR320C NKP1Q12493 238 aa2.98□□□□□ -1.93
SWA2YDR320C CTS1P29029 562 aa2.97□□□□□ -1.93
SWA2YDR320C SEC6P32844 805 aa2.97□□□□□ -1.93
SWA2YDR320C TOD6P34219 525 aa2.97□□□□□ -1.93
SWA2YDR320C YPT53P36019 220 aa2.97□□□□□ -1.93
SWA2YDR320C VPS24P36095 224 aaKnown RBP2.97□□□□□ -1.93
SWA2YDR320C PTC7P38797 343 aa2.97□□□□□ -1.93
SWA2YDR320C TAT2P38967 592 aa2.97□□□□□ -1.93
SWA2YDR320C YJR142WP47173 342 aa2.97□□□□□ -1.93
SWA2YDR320C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93 RIP-Chip
SWA2YDR320C POB3Q04636 552 aaKnown RBP2.97□□□□□ -1.93
SWA2YDR320C YPL277CQ08989 487 aa2.97□□□□□ -1.93
SWA2YDR320C MNL2Q12205 849 aa2.97□□□□□ -1.93
SWA2YDR320C RPS13P05756 151 aaKnown RBP2.97□□□□□ -1.93
SWA2YDR320C KAR1P11927 433 aa2.97□□□□□ -1.93
SWA2YDR320C PRE10P21242 288 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
SWA2YDR320C PWP2P25635 923 aaKnown RBP2.97□□□□□ -1.93
SWA2YDR320C YKL091CP33324 310 aaKnown RBP2.97□□□□□ -1.93
SWA2YDR320C ATG1P53104 897 aa2.97□□□□□ -1.93
SWA2YDR320C RSC4Q02206 625 aa2.97□□□□□ -1.93
SWA2YDR320C PBP2P38151 413 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
SWA2YDR320C NOC2P39744 710 aaKnown RBP2.96□□□□□ -1.94
SWA2YDR320C YGL081WP53156 320 aa2.96□□□□□ -1.94
SWA2YDR320C SNO2P53823 222 aa2.96□□□□□ -1.94
SWA2YDR320C ALD6P54115 500 aaKnown RBP2.96□□□□□ -1.94
SWA2YDR320C ALG6Q12001 544 aaKnown RBP2.96□□□□□ -1.94
SWA2YDR320C YLR358CO13565 187 aa2.95□□□□□ -1.94
SWA2YDR320C THS1P04801 734 aaKnown RBP2.95□□□□□ -1.94
SWA2YDR320C MET4P32389 672 aa2.95□□□□□ -1.94
SWA2YDR320C DUR3P33413 735 aa2.95□□□□□ -1.94
SWA2YDR320C MFT1P33441 392 aaKnown RBP2.95□□□□□ -1.94
SWA2YDR320C FYV10P40492 516 aa2.95□□□□□ -1.94
SWA2YDR320C FAF1P40546 346 aaPredicted RBP2.95□□□□□ -1.94
SWA2YDR320C MPP10P47083 593 aaKnown RBP2.95□□□□□ -1.94
SWA2YDR320C YGR045CP53229 120 aa2.95□□□□□ -1.94
SWA2YDR320C VPS16Q03308 798 aa2.95□□□□□ -1.94
SWA2YDR320C PPM2Q08282 695 aa2.95□□□□□ -1.94
SWA2YDR320C PUS7Q08647 676 aaKnown RBP2.95□□□□□ -1.94
SWA2YDR320C TUB2P02557 457 aaKnown RBP2.95□□□□□ -1.94
SWA2YDR320C SAM35P14693 329 aa2.95□□□□□ -1.94
SWA2YDR320C TRX2P22803 104 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 368.6 ms