RNA–Protein interactions for RNA: YDR320C

SWA2, Transcript of Auxilin-like protein involved in vesicular transport, yeast

Gene SWA2, Length 2,007 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWA2	YDR320C	WHI5	Q12416	295 aa		3.03	□□□□□ -1.92
SWA2	YDR320C	LSO1	Q3E827	93 aa		3.03	□□□□□ -1.92
SWA2	YDR320C	HTS1	P07263	546 aa	Known RBP	3.02	□□□□□ -1.93
SWA2	YDR320C	SEC20	P28791	383 aa		3.02	□□□□□ -1.93
SWA2	YDR320C	RIM11	P38615	370 aa		3.02	□□□□□ -1.93
SWA2	YDR320C	BUD6	P41697	788 aa		3.02	□□□□□ -1.93
SWA2	YDR320C	MRPL22	P53881	309 aa		3.02	□□□□□ -1.93
SWA2	YDR320C	MEC3	Q02574	474 aa		3.02	□□□□□ -1.93
SWA2	YDR320C	YBL113C	Q7M4S9	792 aa		3.02	□□□□□ -1.93
SWA2	YDR320C	DAL5	P15365	543 aa		3.02	□□□□□ -1.93
SWA2	YDR320C	RPB10	P22139	70 aa		3.02	□□□□□ -1.93
SWA2	YDR320C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
SWA2	YDR320C	RRP14	P36080	434 aa	Known RBP	3.02	□□□□□ -1.93
SWA2	YDR320C	ERP5	P38819	212 aa		3.02	□□□□□ -1.93
SWA2	YDR320C	RPT2	P40327	437 aa	Known RBP	3.02	□□□□□ -1.93
SWA2	YDR320C	DNM1	P54861	757 aa		3.02	□□□□□ -1.93
SWA2	YDR320C	EAR1	Q03212	550 aa		3.02	□□□□□ -1.93
SWA2	YDR320C	SEC8	P32855	1065 aa		3.01	□□□□□ -1.93
SWA2	YDR320C	NFU1	P32860	256 aa		3.01	□□□□□ -1.93
SWA2	YDR320C	RPS0A	P32905	252 aa	Known RBP	3.01	□□□□□ -1.93
SWA2	YDR320C	EBP2	P36049	427 aa	Known RBP	3.01	□□□□□ -1.93
SWA2	YDR320C	POL32	P47110	350 aa		3.01	□□□□□ -1.93
SWA2	YDR320C	COB	P00163	385 aa		3	□□□□□ -1.93
SWA2	YDR320C	PRO1	P32264	428 aa		3	□□□□□ -1.93
SWA2	YDR320C	PPG1	P32838	368 aa		3	□□□□□ -1.93
SWA2	YDR320C	SMY2	P32909	740 aa	Known RBP	3	□□□□□ -1.93
SWA2	YDR320C	MDJ2	P42834	146 aa		3	□□□□□ -1.93
SWA2	YDR320C	RPN4	Q03465	531 aa		3	□□□□□ -1.93
SWA2	YDR320C	CMR1	Q12510	522 aa	Known RBP	3	□□□□□ -1.93
SWA2	YDR320C	NPR1	P22211	790 aa		3	□□□□□ -1.93
SWA2	YDR320C	NFS1	P25374	497 aa		3	□□□□□ -1.93
SWA2	YDR320C	ABZ1	P37254	787 aa	Predicted RBP	3	□□□□□ -1.93
SWA2	YDR320C	ERP2	P39704	215 aa		3	□□□□□ -1.93
SWA2	YDR320C	NOP2	P40991	618 aa	Known RBP	3	□□□□□ -1.93
SWA2	YDR320C	YJR107W	P47145	328 aa		3	□□□□□ -1.93
SWA2	YDR320C	OYE2	Q03558	400 aa	Known RBP	3	□□□□□ -1.93
SWA2	YDR320C	TMA64	Q04600	565 aa	Known RBP	3	□□□□□ -1.93
SWA2	YDR320C	PNP1	Q05788	311 aa		3	□□□□□ -1.93
SWA2	YDR320C	ARL1	P38116	183 aa	Known RBP	2.99	□□□□□ -1.93
SWA2	YDR320C	YHL050C	P38721	697 aa		2.99	□□□□□ -1.93
SWA2	YDR320C	YHR219W	P38900	624 aa		2.99	□□□□□ -1.93
SWA2	YDR320C	CLU1	Q03690	1277 aa	Known RBP	2.99	□□□□□ -1.93
SWA2	YDR320C	ECM16	Q04217	1267 aa	Known RBP	2.99	□□□□□ -1.93
SWA2	YDR320C	SSF2	Q12153	453 aa	Predicted RBP	2.99	□□□□□ -1.93
SWA2	YDR320C	TAF13	P11747	167 aa		2.98	□□□□□ -1.93
SWA2	YDR320C	FUI1	P38196	639 aa		2.98	□□□□□ -1.93
SWA2	YDR320C	PPX1	P38698	397 aa		2.98	□□□□□ -1.93
SWA2	YDR320C	UBP12	P39538	1254 aa		2.98	□□□□□ -1.93
SWA2	YDR320C	VAC8	P39968	578 aa		2.98	□□□□□ -1.93
SWA2	YDR320C	SAP155	P43612	1002 aa		2.98	□□□□□ -1.93
SWA2	YDR320C	UTP22	P53254	1237 aa	Predicted RBP	2.98	□□□□□ -1.93
SWA2	YDR320C	JIP5	Q06214	492 aa	Predicted RBP	2.98	□□□□□ -1.93
SWA2	YDR320C	SRP40	P32583	406 aa	Predicted RBP	2.98	□□□□□ -1.93
SWA2	YDR320C	NNK1	P36003	928 aa		2.98	□□□□□ -1.93
SWA2	YDR320C	REI1	P38344	393 aa	Predicted RBP	2.98	□□□□□ -1.93
SWA2	YDR320C	GLO3	P38682	493 aa	Known RBP	2.98	□□□□□ -1.93
SWA2	YDR320C	VPS27	P40343	622 aa	Known RBP	2.98	□□□□□ -1.93
SWA2	YDR320C	NSE3	Q05541	303 aa		2.98	□□□□□ -1.93
SWA2	YDR320C	COG4	Q06096	861 aa		2.98	□□□□□ -1.93
SWA2	YDR320C	NKP1	Q12493	238 aa		2.98	□□□□□ -1.93
SWA2	YDR320C	CTS1	P29029	562 aa		2.97	□□□□□ -1.93
SWA2	YDR320C	SEC6	P32844	805 aa		2.97	□□□□□ -1.93
SWA2	YDR320C	TOD6	P34219	525 aa		2.97	□□□□□ -1.93
SWA2	YDR320C	YPT53	P36019	220 aa		2.97	□□□□□ -1.93
SWA2	YDR320C	VPS24	P36095	224 aa	Known RBP	2.97	□□□□□ -1.93
SWA2	YDR320C	PTC7	P38797	343 aa		2.97	□□□□□ -1.93
SWA2	YDR320C	TAT2	P38967	592 aa		2.97	□□□□□ -1.93
SWA2	YDR320C	YJR142W	P47173	342 aa		2.97	□□□□□ -1.93
SWA2	YDR320C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	RIP-Chip
SWA2	YDR320C	POB3	Q04636	552 aa	Known RBP	2.97	□□□□□ -1.93
SWA2	YDR320C	YPL277C	Q08989	487 aa		2.97	□□□□□ -1.93
SWA2	YDR320C	MNL2	Q12205	849 aa		2.97	□□□□□ -1.93
SWA2	YDR320C	RPS13	P05756	151 aa	Known RBP	2.97	□□□□□ -1.93
SWA2	YDR320C	KAR1	P11927	433 aa		2.97	□□□□□ -1.93
SWA2	YDR320C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
SWA2	YDR320C	PWP2	P25635	923 aa	Known RBP	2.97	□□□□□ -1.93
SWA2	YDR320C	YKL091C	P33324	310 aa	Known RBP	2.97	□□□□□ -1.93
SWA2	YDR320C	ATG1	P53104	897 aa		2.97	□□□□□ -1.93
SWA2	YDR320C	RSC4	Q02206	625 aa		2.97	□□□□□ -1.93
SWA2	YDR320C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
SWA2	YDR320C	NOC2	P39744	710 aa	Known RBP	2.96	□□□□□ -1.94
SWA2	YDR320C	YGL081W	P53156	320 aa		2.96	□□□□□ -1.94
SWA2	YDR320C	SNO2	P53823	222 aa		2.96	□□□□□ -1.94
SWA2	YDR320C	ALD6	P54115	500 aa	Known RBP	2.96	□□□□□ -1.94
SWA2	YDR320C	ALG6	Q12001	544 aa	Known RBP	2.96	□□□□□ -1.94
SWA2	YDR320C	YLR358C	O13565	187 aa		2.95	□□□□□ -1.94
SWA2	YDR320C	THS1	P04801	734 aa	Known RBP	2.95	□□□□□ -1.94
SWA2	YDR320C	MET4	P32389	672 aa		2.95	□□□□□ -1.94
SWA2	YDR320C	DUR3	P33413	735 aa		2.95	□□□□□ -1.94
SWA2	YDR320C	MFT1	P33441	392 aa	Known RBP	2.95	□□□□□ -1.94
SWA2	YDR320C	FYV10	P40492	516 aa		2.95	□□□□□ -1.94
SWA2	YDR320C	FAF1	P40546	346 aa	Predicted RBP	2.95	□□□□□ -1.94
SWA2	YDR320C	MPP10	P47083	593 aa	Known RBP	2.95	□□□□□ -1.94
SWA2	YDR320C	YGR045C	P53229	120 aa		2.95	□□□□□ -1.94
SWA2	YDR320C	VPS16	Q03308	798 aa		2.95	□□□□□ -1.94
SWA2	YDR320C	PPM2	Q08282	695 aa		2.95	□□□□□ -1.94
SWA2	YDR320C	PUS7	Q08647	676 aa	Known RBP	2.95	□□□□□ -1.94
SWA2	YDR320C	TUB2	P02557	457 aa	Known RBP	2.95	□□□□□ -1.94
SWA2	YDR320C	SAM35	P14693	329 aa		2.95	□□□□□ -1.94
SWA2	YDR320C	TRX2	P22803	104 aa	Known RBP	2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms