RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C BAS1P22035 811 aa7.31□□□□□ -1.24
RTN1YDR233C SPF1P39986 1215 aaKnown RBP7.31□□□□□ -1.24
RTN1YDR233C IOC3P43596 787 aa7.31□□□□□ -1.24
RTN1YDR233C TYW3P53177 273 aa7.31□□□□□ -1.24
RTN1YDR233C BUD9P53226 547 aa7.31□□□□□ -1.24
RTN1YDR233C YGR045CP53229 120 aa7.31□□□□□ -1.24
RTN1YDR233C TDA6Q06466 467 aa7.31□□□□□ -1.24
RTN1YDR233C THI72Q08579 599 aa7.31□□□□□ -1.24
RTN1YDR233C YOL098CQ12496 1037 aa7.31□□□□□ -1.24
RTN1YDR233C SEA4P38164 1038 aa7.3□□□□□ -1.24
RTN1YDR233C MCX1P38323 520 aaPredicted RBP7.3□□□□□ -1.24
RTN1YDR233C YAR028WP39548 234 aa7.3□□□□□ -1.24
RTN1YDR233C NCE103P53615 221 aa7.3□□□□□ -1.24
RTN1YDR233C YLL054CQ12244 843 aa7.3□□□□□ -1.24
RTN1YDR233C SYP1P25623 870 aaKnown RBP7.29□□□□□ -1.24
RTN1YDR233C MDJ1P35191 511 aa7.29□□□□□ -1.24
RTN1YDR233C YNR063WP53749 607 aa7.29□□□□□ -1.24
RTN1YDR233C TIF35Q04067 274 aaKnown RBP7.29□□□□□ -1.24
RTN1YDR233C TDA5Q06417 326 aaKnown RBP7.29□□□□□ -1.24
RTN1YDR233C YOR223WQ12015 292 aa7.29□□□□□ -1.24
RTN1YDR233C DBP5P20449 482 aaKnown RBP7.28□□□□□ -1.24
RTN1YDR233C GRX1P25373 110 aaKnown RBP7.28□□□□□ -1.24
RTN1YDR233C ALG3P38179 458 aa7.28□□□□□ -1.24
RTN1YDR233C DOT1Q04089 582 aaKnown RBP7.28□□□□□ -1.24
RTN1YDR233C SFA1P32771 386 aa7.27□□□□□ -1.25
RTN1YDR233C ABD1P32783 436 aaPredicted RBP7.27□□□□□ -1.25
RTN1YDR233C MOT2P34909 587 aaKnown RBP7.27□□□□□ -1.25
RTN1YDR233C YJL049WP47048 450 aa7.27□□□□□ -1.25
RTN1YDR233C ELA1P53861 379 aaPredicted RBP7.27□□□□□ -1.25
RTN1YDR233C YLR225CQ05948 407 aaKnown RBP7.27□□□□□ -1.25
RTN1YDR233C AOS1Q06624 347 aa7.27□□□□□ -1.25
RTN1YDR233C AVO1Q08236 1176 aa7.27□□□□□ -1.25
RTN1YDR233C AI3P03877 415 aa7.26□□□□□ -1.25
RTN1YDR233C CNN1P43618 361 aa7.26□□□□□ -1.25
RTN1YDR233C NSG2P53898 299 aa7.26□□□□□ -1.25
RTN1YDR233C YPL066WQ12194 479 aa7.26□□□□□ -1.25
RTN1YDR233C AGP1P25376 633 aa7.25□□□□□ -1.25
RTN1YDR233C GPT2P36148 743 aa7.25□□□□□ -1.25
RTN1YDR233C ATG14P38270 344 aa7.25□□□□□ -1.25
RTN1YDR233C MPH1P40562 993 aa7.25□□□□□ -1.25
RTN1YDR233C PRY1P47032 299 aa7.25□□□□□ -1.25
RTN1YDR233C SPO20Q04359 397 aa7.25□□□□□ -1.25
RTN1YDR233C NSE3Q05541 303 aa7.25□□□□□ -1.25
RTN1YDR233C YDR215CQ12240 137 aa7.25□□□□□ -1.25
RTN1YDR233C INO1P11986 533 aa7.24□□□□□ -1.25
RTN1YDR233C YCK2P23292 546 aaKnown RBP7.24□□□□□ -1.25
RTN1YDR233C PUF4P25339 888 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
RTN1YDR233C STE5P32917 917 aa7.24□□□□□ -1.25
RTN1YDR233C NAN1Q02931 896 aaKnown RBP7.24□□□□□ -1.25
RTN1YDR233C RSA3Q05942 220 aaKnown RBP7.24□□□□□ -1.25
RTN1YDR233C BDF2Q07442 638 aa7.24□□□□□ -1.25
RTN1YDR233C SBA1P28707 216 aaKnown RBP7.23□□□□□ -1.25
RTN1YDR233C SLN1P39928 1220 aaPredicted RBP7.23□□□□□ -1.25
RTN1YDR233C MSH4P40965 878 aaPredicted RBP7.23□□□□□ -1.25
RTN1YDR233C PTC5Q12511 572 aa7.23□□□□□ -1.25
RTN1YDR233C RAD4P14736 754 aa7.22□□□□□ -1.25
RTN1YDR233C VBA5P36172 582 aa7.22□□□□□ -1.25
RTN1YDR233C MCM7P38132 845 aa7.22□□□□□ -1.25
RTN1YDR233C QNS1P38795 714 aaKnown RBP7.22□□□□□ -1.25
RTN1YDR233C LAP2Q10740 671 aa7.22□□□□□ -1.25
RTN1YDR233C RET1P22276 1149 aaKnown RBP7.21□□□□□ -1.26
RTN1YDR233C MLS1P30952 554 aa7.21□□□□□ -1.26
RTN1YDR233C RGD1P38339 666 aa7.21□□□□□ -1.26
RTN1YDR233C VPS53P47061 822 aa7.21□□□□□ -1.26
RTN1YDR233C SHE9Q04172 456 aa7.21□□□□□ -1.26
RTN1YDR233C YLR257WQ06146 321 aaKnown RBP7.21□□□□□ -1.26
RTN1YDR233C RKM4Q12504 494 aa7.21□□□□□ -1.26
RTN1YDR233C SRP40P32583 406 aaPredicted RBP7.2□□□□□ -1.26
RTN1YDR233C SMY2P32909 740 aaKnown RBP7.2□□□□□ -1.26
RTN1YDR233C HSE1P38753 452 aa7.2□□□□□ -1.26
RTN1YDR233C YGL176CP46945 554 aa7.2□□□□□ -1.26
RTN1YDR233C HNT2P49775 206 aa7.2□□□□□ -1.26
RTN1YDR233C ARI1P53111 347 aaKnown RBP7.2□□□□□ -1.26
RTN1YDR233C HUL5P53119 910 aa7.2□□□□□ -1.26
RTN1YDR233C CDC53Q12018 815 aaKnown RBP7.2□□□□□ -1.26
RTN1YDR233C STI1P15705 589 aaKnown RBP RIP-Chip data7.19□□□□□ -1.26not detected
RTN1YDR233C RSC6P25632 483 aa7.19□□□□□ -1.26
RTN1YDR233C YKL091CP33324 310 aaKnown RBP7.19□□□□□ -1.26
RTN1YDR233C YKL107WP34251 309 aa7.19□□□□□ -1.26
RTN1YDR233C NNK1P36003 928 aa7.19□□□□□ -1.26
RTN1YDR233C YBR184WP38299 523 aa7.19□□□□□ -1.26
RTN1YDR233C NMD3P38861 518 aaKnown RBP7.19□□□□□ -1.26
RTN1YDR233C FPR4Q06205 392 aaPredicted RBP7.19□□□□□ -1.26
RTN1YDR233C NFS1P25374 497 aa7.18□□□□□ -1.26
RTN1YDR233C KIP1P28742 1111 aa7.18□□□□□ -1.26
RTN1YDR233C MRP8P35719 219 aa7.18□□□□□ -1.26
RTN1YDR233C YHR020WP38708 688 aaKnown RBP7.18□□□□□ -1.26
RTN1YDR233C TIM54P47045 478 aa7.18□□□□□ -1.26
RTN1YDR233C ALT1P52893 592 aa7.18□□□□□ -1.26
RTN1YDR233C EAR1Q03212 550 aa7.18□□□□□ -1.26
RTN1YDR233C YMR187CQ03236 431 aa7.18□□□□□ -1.26
RTN1YDR233C YER152CP10356 443 aa7.17□□□□□ -1.26
RTN1YDR233C MBP1P39678 833 aa7.17□□□□□ -1.26
RTN1YDR233C GPB2P39717 880 aa7.17□□□□□ -1.26
RTN1YDR233C SIP5P40210 489 aaKnown RBP7.17□□□□□ -1.26
RTN1YDR233C PFD1P46988 109 aa7.17□□□□□ -1.26
RTN1YDR233C RPN4Q03465 531 aa7.17□□□□□ -1.26
RTN1YDR233C GNT1Q12096 491 aa7.17□□□□□ -1.26
RTN1YDR233C PHM7Q12252 991 aa7.17□□□□□ -1.26
RTN1YDR233C YPR053CQ6Q5F3 151 aa7.17□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms