RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 MAP3K5Q99683 1374 aa22.79■■□□□ 1.24
PHGDH-232ENST00000641947 PRDM11Q9NQV5 511 aa22.78■■□□□ 1.24
PHGDH-232ENST00000641947 COL5A2P05997 1499 aaPredicted RBP22.78■■□□□ 1.24
PHGDH-232ENST00000641947 EXOC6Q8TAG9 804 aa22.78■■□□□ 1.24
PHGDH-232ENST00000641947 MEGF6O75095 1541 aa22.77■■□□□ 1.24
PHGDH-232ENST00000641947 BCL2L13Q9BXK5 485 aa22.77■■□□□ 1.24
PHGDH-232ENST00000641947 PPP4R2Q9NY27 417 aa22.77■■□□□ 1.24
PHGDH-232ENST00000641947 PKD1L3Q7Z443 1732 aa22.77■■□□□ 1.24
PHGDH-232ENST00000641947 GNAT3A8MTJ3 354 aa22.76■■□□□ 1.23
PHGDH-232ENST00000641947 HAP1P54257 671 aaPredicted RBP22.76■■□□□ 1.23
PHGDH-232ENST00000641947 NLRP2Q9NX02 1062 aa22.76■■□□□ 1.23
PHGDH-232ENST00000641947 CT47B1P0C2W7 299 aaPredicted RBP22.76■■□□□ 1.23
PHGDH-232ENST00000641947 AEBP2Q6ZN18 517 aaPredicted RBP22.76■■□□□ 1.23
PHGDH-232ENST00000641947 TSPYL6Q8N831 410 aa22.75■■□□□ 1.23
PHGDH-232ENST00000641947 IL17REQ8NFR9 667 aa22.75■■□□□ 1.23
PHGDH-232ENST00000641947 ADAMTS7Q9UKP4 1686 aa22.75■■□□□ 1.23
PHGDH-232ENST00000641947 CHL1O00533 1208 aa22.74■■□□□ 1.23
PHGDH-232ENST00000641947 HTATSF1O43719 755 aaKnown RBP22.74■■□□□ 1.23
PHGDH-232ENST00000641947 RTF1Q92541 710 aaKnown RBP22.74■■□□□ 1.23
PHGDH-232ENST00000641947 CRBNQ96SW2 442 aa22.74■■□□□ 1.23
PHGDH-232ENST00000641947 COL14A1Q05707 1796 aaKnown RBP22.74■■□□□ 1.23
PHGDH-232ENST00000641947 CSB-PGBD3P0DP91 1061 aa22.73■■□□□ 1.23
PHGDH-232ENST00000641947 PIP4K2BP78356 416 aa22.73■■□□□ 1.23
PHGDH-232ENST00000641947 SIPA1L3O60292 1781 aaPredicted RBP22.73■■□□□ 1.23
PHGDH-232ENST00000641947 TOM1O60784 492 aa22.73■■□□□ 1.23
PHGDH-232ENST00000641947 C8orf58Q8NAV2 365 aa22.72■■□□□ 1.23
PHGDH-232ENST00000641947 SSH1Q8WYL5 1049 aa22.72■■□□□ 1.23
PHGDH-232ENST00000641947 PARP4Q9UKK3 1724 aaKnown RBP22.72■■□□□ 1.23
PHGDH-232ENST00000641947 KDM3BQ7LBC6 1761 aa22.72■■□□□ 1.23
PHGDH-232ENST00000641947 B4GALNT3Q6L9W6 998 aa22.71■■□□□ 1.23
PHGDH-232ENST00000641947 ZNF530Q6P9A1 599 aaPredicted RBP22.71■■□□□ 1.23
PHGDH-232ENST00000641947 WDR17Q8IZU2 1322 aa22.71■■□□□ 1.23
PHGDH-232ENST00000641947 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.71■■□□□ 1.23
PHGDH-232ENST00000641947 CEMIPQ8WUJ3 1361 aa22.71■■□□□ 1.23
PHGDH-232ENST00000641947 MIS18AQ9NYP9 233 aa22.71■■□□□ 1.23
PHGDH-232ENST00000641947 SCN11AQ9UI33 1791 aa22.71■■□□□ 1.23
PHGDH-232ENST00000641947 PLEKHO1Q53GL0 409 aaPredicted RBP22.71■■□□□ 1.23
PHGDH-232ENST00000641947 TNNQ9UQP3 1299 aa22.71■■□□□ 1.23
PHGDH-232ENST00000641947 PLCH1Q4KWH8 1693 aa22.7■■□□□ 1.22
PHGDH-232ENST00000641947 VAMP4O75379 141 aa22.7■■□□□ 1.22
PHGDH-232ENST00000641947 KRT24Q2M2I5 525 aa22.7■■□□□ 1.22
PHGDH-232ENST00000641947 SHANK3Q9BYB0 1731 aa22.7■■□□□ 1.22
PHGDH-232ENST00000641947 AMOTQ4VCS5 1084 aa22.69■■□□□ 1.22
PHGDH-232ENST00000641947 UBAP1LF5GYI3 381 aa22.68■■□□□ 1.22
PHGDH-232ENST00000641947 ELL2O00472 640 aaPredicted RBP22.68■■□□□ 1.22
PHGDH-232ENST00000641947 AKAP4Q5JQC9 854 aa22.68■■□□□ 1.22
PHGDH-232ENST00000641947 LGR6Q9HBX8 967 aa22.68■■□□□ 1.22
PHGDH-232ENST00000641947 FRAT1Q92837 279 aaPredicted RBP22.68■■□□□ 1.22
PHGDH-232ENST00000641947 SMC4Q9NTJ3 1288 aa22.68■■□□□ 1.22
PHGDH-232ENST00000641947 TWISTNBQ3B726 338 aaPredicted RBP22.66■■□□□ 1.22
PHGDH-232ENST00000641947 RAPGEF4Q8WZA2 1011 aa22.66■■□□□ 1.22
PHGDH-232ENST00000641947 NRAPQ86VF7 1730 aa22.65■■□□□ 1.22
PHGDH-232ENST00000641947 LARP1Q6PKG0 1096 aaKnown RBP22.65■■□□□ 1.22
PHGDH-232ENST00000641947 MPRIPQ6WCQ1 1025 aa22.65■■□□□ 1.22
PHGDH-232ENST00000641947 PANK1Q8TE04 598 aa22.65■■□□□ 1.22
PHGDH-232ENST00000641947 TSPYL4Q9UJ04 414 aa22.65■■□□□ 1.22
PHGDH-232ENST00000641947 OVOS2A0A0G2JMS6 1433 aa22.64■■□□□ 1.22
PHGDH-232ENST00000641947 RLBP1P12271 317 aa22.64■■□□□ 1.22
PHGDH-232ENST00000641947 TATP17735 454 aaPredicted RBP22.64■■□□□ 1.22
PHGDH-232ENST00000641947 ALDH1L2Q3SY69 923 aa22.64■■□□□ 1.22
PHGDH-232ENST00000641947 CANXP27824 592 aaKnown RBP22.63■■□□□ 1.21
PHGDH-232ENST00000641947 TOM1L2Q6ZVM7 507 aa22.63■■□□□ 1.21
PHGDH-232ENST00000641947 STRN4Q9NRL3 753 aa22.63■■□□□ 1.21
PHGDH-232ENST00000641947 PLEKHG2Q9H7P9 1386 aa22.63■■□□□ 1.21
PHGDH-232ENST00000641947 WNK3Q9BYP7 1800 aa22.63■■□□□ 1.21
PHGDH-232ENST00000641947 PDE3AQ14432 1141 aa22.63■■□□□ 1.21
PHGDH-232ENST00000641947 KDM6AO15550 1401 aaPredicted RBP22.62■■□□□ 1.21
PHGDH-232ENST00000641947 C1orf141Q5JVX7 400 aa22.62■■□□□ 1.21
PHGDH-232ENST00000641947 ZNF428Q96B54 188 aa22.62■■□□□ 1.21
PHGDH-232ENST00000641947 BTG4Q9NY30 223 aa22.62■■□□□ 1.21
PHGDH-232ENST00000641947 TCERG1O14776 1098 aaKnown RBP22.61■■□□□ 1.21
PHGDH-232ENST00000641947 RNMTO43148 476 aaKnown RBP22.61■■□□□ 1.21
PHGDH-232ENST00000641947 TAF7Q15545 349 aaPredicted RBP22.61■■□□□ 1.21
PHGDH-232ENST00000641947 MRPL50Q8N5N7 158 aaKnown RBP22.61■■□□□ 1.21
PHGDH-232ENST00000641947 CARD10Q9BWT7 1032 aa22.61■■□□□ 1.21
PHGDH-232ENST00000641947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.6■■□□□ 1.21
PHGDH-232ENST00000641947 NOB1Q9ULX3 412 aaKnown RBP22.6■■□□□ 1.21
PHGDH-232ENST00000641947 PHKG2P15735 406 aa22.59■■□□□ 1.21
PHGDH-232ENST00000641947 BRPF1P55201 1214 aaPredicted RBP22.59■■□□□ 1.21
PHGDH-232ENST00000641947 ZKSCAN2Q63HK3 967 aa22.59■■□□□ 1.21
PHGDH-232ENST00000641947 CERKQ8TCT0 537 aa22.59■■□□□ 1.21
PHGDH-232ENST00000641947 CYP27B1O15528 508 aa22.58■■□□□ 1.21
PHGDH-232ENST00000641947 TRIM27P14373 513 aa22.58■■□□□ 1.21
PHGDH-232ENST00000641947 CLUAP1Q96AJ1 413 aa22.58■■□□□ 1.21
PHGDH-232ENST00000641947 CCDC136Q96JN2 1154 aa22.58■■□□□ 1.21
PHGDH-232ENST00000641947 COG6Q9Y2V7 657 aa22.58■■□□□ 1.21
PHGDH-232ENST00000641947 EVA1CP58658 441 aa22.58■■□□□ 1.2
PHGDH-232ENST00000641947 BABAM1Q9NWV8 329 aa22.58■■□□□ 1.2
PHGDH-232ENST00000641947 SPG7Q9UQ90 795 aa22.58■■□□□ 1.2
PHGDH-232ENST00000641947 KIF16BQ96L93 1317 aa22.56■■□□□ 1.2
PHGDH-232ENST00000641947 NWD2Q9ULI1 1742 aa22.56■■□□□ 1.2
PHGDH-232ENST00000641947 MRC1P22897 1456 aa22.56■■□□□ 1.2
PHGDH-232ENST00000641947 CACNA1FO60840 1977 aa22.56■■□□□ 1.2
PHGDH-232ENST00000641947 ADAMTS2O95450 1211 aa22.55■■□□□ 1.2
PHGDH-232ENST00000641947 ATF7IPQ6VMQ6 1270 aa22.55■■□□□ 1.2
PHGDH-232ENST00000641947 KCNQ3O43525 872 aa22.55■■□□□ 1.2
PHGDH-232ENST00000641947 TEFQ10587 303 aa22.54■■□□□ 1.2
PHGDH-232ENST00000641947 DZIP1LQ8IYY4 767 aaKnown RBP22.53■■□□□ 1.2
PHGDH-232ENST00000641947 IFNL2Q8IZJ0 200 aa22.53■■□□□ 1.2
PHGDH-232ENST00000641947 TOGARAM1Q9Y4F4 1720 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms