RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 TRIM35Q9UPQ4 493 aa11.18□□□□□ -0.62
PAX6-259ENST00000639916 MAP2P11137 1827 aaKnown RBP11.18□□□□□ -0.62
PAX6-259ENST00000639916 RARSP54136 660 aaKnown RBP11.18□□□□□ -0.62
PAX6-259ENST00000639916 ATP2B3Q16720 1220 aa11.18□□□□□ -0.62
PAX6-259ENST00000639916 TBC1D32Q96NH3 1257 aa11.18□□□□□ -0.62
PAX6-259ENST00000639916 ACEP12821 1306 aa11.18□□□□□ -0.62
PAX6-259ENST00000639916 IRX3P78415 501 aaPredicted RBP11.17□□□□□ -0.62
PAX6-259ENST00000639916 RRS1Q15050 365 aaKnown RBP11.17□□□□□ -0.62
PAX6-259ENST00000639916 HS1BP3Q53T59 392 aa11.17□□□□□ -0.62
PAX6-259ENST00000639916 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
PAX6-259ENST00000639916 PLEKHG3A1L390 1219 aa11.17□□□□□ -0.62
PAX6-259ENST00000639916 PRKAR2BP31323 418 aa11.17□□□□□ -0.62
PAX6-259ENST00000639916 IRX5P78411 483 aaPredicted RBP11.17□□□□□ -0.62
PAX6-259ENST00000639916 AATKQ6ZMQ8 1374 aa11.17□□□□□ -0.62
PAX6-259ENST00000639916 CSPP1Q1MSJ5 1256 aa11.16□□□□□ -0.62
PAX6-259ENST00000639916 TSR2Q969E8 191 aaKnown RBP11.16□□□□□ -0.62
PAX6-259ENST00000639916 CHMP4AQ9BY43 222 aa11.16□□□□□ -0.62
PAX6-259ENST00000639916 MON2Q7Z3U7 1717 aa11.16□□□□□ -0.62
PAX6-259ENST00000639916 HMOX1P09601 288 aa11.16□□□□□ -0.62
PAX6-259ENST00000639916 PDE3AQ14432 1141 aa11.16□□□□□ -0.62
PAX6-259ENST00000639916 ZNF710Q8N1W2 664 aa11.16□□□□□ -0.62
PAX6-259ENST00000639916 TTC21BQ7Z4L5 1316 aa11.16□□□□□ -0.62
PAX6-259ENST00000639916 ITSN1Q15811 1721 aa11.15□□□□□ -0.62
PAX6-259ENST00000639916 IL13P35225 146 aa11.15□□□□□ -0.62
PAX6-259ENST00000639916 BCL2L13Q9BXK5 485 aa11.15□□□□□ -0.62
PAX6-259ENST00000639916 AKAP12Q02952 1782 aa11.15□□□□□ -0.62
PAX6-259ENST00000639916 PANK1Q8TE04 598 aa11.15□□□□□ -0.62
PAX6-259ENST00000639916 KDM4FA0A1W2PPD8 638 aa11.14□□□□□ -0.63
PAX6-259ENST00000639916 PMFBP1Q8TBY8 1022 aa11.14□□□□□ -0.63
PAX6-259ENST00000639916 JARID2Q92833 1246 aaPredicted RBP11.14□□□□□ -0.63
PAX6-259ENST00000639916 PTCH1Q13635 1447 aa11.14□□□□□ -0.63
PAX6-259ENST00000639916 NPM3O75607 178 aaKnown RBP11.14□□□□□ -0.63
PAX6-259ENST00000639916 PHACTR3Q96KR7 559 aa11.14□□□□□ -0.63
PAX6-259ENST00000639916 IGSF3O75054 1194 aa11.13□□□□□ -0.63
PAX6-259ENST00000639916 KCNA6P17658 529 aa11.13□□□□□ -0.63
PAX6-259ENST00000639916 UPF2Q9HAU5 1272 aaKnown RBP11.13□□□□□ -0.63
PAX6-259ENST00000639916 COG6Q9Y2V7 657 aa11.13□□□□□ -0.63
PAX6-259ENST00000639916 LRRC7Q96NW7 1537 aa11.13□□□□□ -0.63
PAX6-259ENST00000639916 CDK12Q9NYV4 1490 aaPredicted RBP11.13□□□□□ -0.63
PAX6-259ENST00000639916 IL16Q14005 1332 aa11.13□□□□□ -0.63
PAX6-259ENST00000639916 EXOSC9Q06265 439 aaKnown RBP11.13□□□□□ -0.63
PAX6-259ENST00000639916 SLC20A2Q08357 652 aa11.13□□□□□ -0.63
PAX6-259ENST00000639916 USP6P35125 1406 aa11.13□□□□□ -0.63
PAX6-259ENST00000639916 CEP170BQ9Y4F5 1589 aaPredicted RBP11.12□□□□□ -0.63
PAX6-259ENST00000639916 ZKSCAN5Q9Y2L8 839 aa11.12□□□□□ -0.63
PAX6-259ENST00000639916 DIP2AQ14689 1571 aa11.12□□□□□ -0.63
PAX6-259ENST00000639916 CT47B1P0C2W7 299 aaPredicted RBP11.12□□□□□ -0.63
PAX6-259ENST00000639916 NGDNQ8NEJ9 315 aaKnown RBP11.12□□□□□ -0.63
PAX6-259ENST00000639916 MYRIPQ8NFW9 859 aa11.12□□□□□ -0.63
PAX6-259ENST00000639916 TSC1Q92574 1164 aa11.12□□□□□ -0.63
PAX6-259ENST00000639916 RIMS1Q86UR5 1692 aaKnown RBP11.12□□□□□ -0.63
PAX6-259ENST00000639916 TOPAZ1Q8N9V7 1692 aa11.12□□□□□ -0.63
PAX6-259ENST00000639916 NFE2L2Q16236 605 aa11.11□□□□□ -0.63
PAX6-259ENST00000639916 SKOR2Q2VWA4 1001 aaPredicted RBP11.11□□□□□ -0.63
PAX6-259ENST00000639916 ANKLE2Q86XL3 938 aa11.11□□□□□ -0.63
PAX6-259ENST00000639916 CERS3Q8IU89 383 aa11.11□□□□□ -0.63
PAX6-259ENST00000639916 C1QBPQ07021 282 aaKnown RBP11.11□□□□□ -0.63
PAX6-259ENST00000639916 SOX12O15370 315 aa11.1□□□□□ -0.63
PAX6-259ENST00000639916 TNNQ9UQP3 1299 aa11.1□□□□□ -0.63
PAX6-259ENST00000639916 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
PAX6-259ENST00000639916 IGHDP01880 384 aa11.1□□□□□ -0.63
PAX6-259ENST00000639916 RLBP1P12271 317 aa11.1□□□□□ -0.63
PAX6-259ENST00000639916 KCNJ4P48050 445 aa11.1□□□□□ -0.63
PAX6-259ENST00000639916 TNPO1Q92973 898 aaKnown RBP11.1□□□□□ -0.63
PAX6-259ENST00000639916 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
PAX6-259ENST00000639916 PDLIM2Q96JY6 352 aa11.1□□□□□ -0.63
PAX6-259ENST00000639916 DNAJC2Q99543 621 aaKnown RBP11.1□□□□□ -0.63
PAX6-259ENST00000639916 MCM5P33992 734 aa11.09□□□□□ -0.63
PAX6-259ENST00000639916 SMC4Q9NTJ3 1288 aa11.09□□□□□ -0.63
PAX6-259ENST00000639916 PIK3R4Q99570 1358 aa11.09□□□□□ -0.63
PAX6-259ENST00000639916 OVOS2A0A0J9YW53 1432 aa11.09□□□□□ -0.63
PAX6-259ENST00000639916 OVOS2Q6IE36 1432 aa11.09□□□□□ -0.63
PAX6-259ENST00000639916 DDIT3P35638 169 aa11.09□□□□□ -0.63
PAX6-259ENST00000639916 ZNF771Q7L3S4 317 aaPredicted RBP11.09□□□□□ -0.63
PAX6-259ENST00000639916 NRKQ7Z2Y5 1582 aa11.09□□□□□ -0.63
PAX6-259ENST00000639916 SSH2Q76I76 1423 aa11.09□□□□□ -0.63
PAX6-259ENST00000639916 EIF4A2Q14240 407 aaKnown RBP11.08□□□□□ -0.64
PAX6-259ENST00000639916 ZKSCAN2Q63HK3 967 aa11.08□□□□□ -0.64
PAX6-259ENST00000639916 SSH1Q8WYL5 1049 aa11.08□□□□□ -0.64
PAX6-259ENST00000639916 THUMPD2Q9BTF0 503 aaKnown RBP11.08□□□□□ -0.64
PAX6-259ENST00000639916 XRN1Q8IZH2 1706 aaKnown RBP11.08□□□□□ -0.64
PAX6-259ENST00000639916 TTC21AQ8NDW8 1320 aa11.08□□□□□ -0.64
PAX6-259ENST00000639916 IBTKQ9P2D0 1353 aaPredicted RBP11.08□□□□□ -0.64
PAX6-259ENST00000639916 HSP90AB2PQ58FF8 381 aa11.07□□□□□ -0.64
PAX6-259ENST00000639916 GBP4Q96PP9 640 aa11.07□□□□□ -0.64
PAX6-259ENST00000639916 RGPD8O14715 1765 aaPredicted RBP11.07□□□□□ -0.64
PAX6-259ENST00000639916 SULT6B1Q6IMI4 303 aa11.07□□□□□ -0.64
PAX6-259ENST00000639916 USP31Q70CQ4 1352 aa11.07□□□□□ -0.64
PAX6-259ENST00000639916 GTF2F1P35269 517 aaKnown RBP eCLIP11.06□□□□□ -0.64
PAX6-259ENST00000639916 AEBP1Q8IUX7 1158 aa11.06□□□□□ -0.64
PAX6-259ENST00000639916 NCOA3Q9Y6Q9 1424 aa11.06□□□□□ -0.64
PAX6-259ENST00000639916 DZIP1LQ8IYY4 767 aaKnown RBP11.06□□□□□ -0.64
PAX6-259ENST00000639916 RBM33Q96EV2 1170 aaKnown RBP11.06□□□□□ -0.64
PAX6-259ENST00000639916 PTMSP20962 102 aa11.05□□□□□ -0.64
PAX6-259ENST00000639916 NLRP6P59044 892 aa11.05□□□□□ -0.64
PAX6-259ENST00000639916 GNAI1P63096 354 aa11.05□□□□□ -0.64
PAX6-259ENST00000639916 LMOD3Q0VAK6 560 aa11.05□□□□□ -0.64
PAX6-259ENST00000639916 MVPQ14764 893 aaKnown RBP11.05□□□□□ -0.64
PAX6-259ENST00000639916 NOB1Q9ULX3 412 aaKnown RBP11.05□□□□□ -0.64
PAX6-259ENST00000639916 MAP3K19Q56UN5 1328 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms