RNA–Protein interactions for RNA: ENST00000639034.1

PAX6-249, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-249ENST00000639034 SHANK3Q9BYB0 1731 aa16.47■□□□□ 0.23
PAX6-249ENST00000639034 PARD3Q8TEW0 1356 aa16.47■□□□□ 0.23
PAX6-249ENST00000639034 DDX54Q8TDD1 881 aaKnown RBP16.47■□□□□ 0.23
PAX6-249ENST00000639034 BCL11BQ9C0K0 894 aaPredicted RBP16.47■□□□□ 0.23
PAX6-249ENST00000639034 NHSQ6T4R5 1651 aa16.47■□□□□ 0.23
PAX6-249ENST00000639034 EN1Q05925 392 aaPredicted RBP16.46■□□□□ 0.23
PAX6-249ENST00000639034 PLEKHG2Q9H7P9 1386 aa16.45■□□□□ 0.22
PAX6-249ENST00000639034 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
PAX6-249ENST00000639034 PCDH11XQ9BZA7 1347 aa16.45■□□□□ 0.22
PAX6-249ENST00000639034 PCDH11YQ9BZA8 1340 aa16.45■□□□□ 0.22
PAX6-249ENST00000639034 RGPD3A6NKT7 1758 aaPredicted RBP16.45■□□□□ 0.22
PAX6-249ENST00000639034 RGPD4Q7Z3J3 1758 aa16.45■□□□□ 0.22
PAX6-249ENST00000639034 MTHFSP49914 203 aa16.45■□□□□ 0.22
PAX6-249ENST00000639034 PKD1L3Q7Z443 1732 aa16.45■□□□□ 0.22
PAX6-249ENST00000639034 EZH2Q15910 746 aaKnown RBP16.42■□□□□ 0.22
PAX6-249ENST00000639034 ACSBG1Q96GR2 724 aa16.42■□□□□ 0.22
PAX6-249ENST00000639034 CAMKK2Q96RR4 588 aa16.42■□□□□ 0.22
PAX6-249ENST00000639034 SPG7Q9UQ90 795 aa16.42■□□□□ 0.22
PAX6-249ENST00000639034 RREB1Q92766 1687 aa16.42■□□□□ 0.22
PAX6-249ENST00000639034 DOT1LQ8TEK3 1739 aa16.41■□□□□ 0.22
PAX6-249ENST00000639034 ANP32CO43423 234 aa16.41■□□□□ 0.22
PAX6-249ENST00000639034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.41■□□□□ 0.22
PAX6-249ENST00000639034 PLSCR1O15162 318 aa16.4■□□□□ 0.22
PAX6-249ENST00000639034 IL13P35225 146 aa16.4■□□□□ 0.22
PAX6-249ENST00000639034 KAT6BQ8WYB5 2073 aa16.4■□□□□ 0.22
PAX6-249ENST00000639034 KCNQ2O43526 872 aa16.39■□□□□ 0.21
PAX6-249ENST00000639034 DIAPH1O60610 1272 aaKnown RBP16.39■□□□□ 0.21
PAX6-249ENST00000639034 BTAF1O14981 1849 aa16.39■□□□□ 0.21
PAX6-249ENST00000639034 KDRP35968 1356 aa16.39■□□□□ 0.21
PAX6-249ENST00000639034 PTF1AQ7RTS3 328 aa16.38■□□□□ 0.21
PAX6-249ENST00000639034 CFAP53Q96M91 514 aa16.38■□□□□ 0.21
PAX6-249ENST00000639034 NUP188Q5SRE5 1749 aa16.38■□□□□ 0.21
PAX6-249ENST00000639034 SYTL4Q96C24 671 aaPredicted RBP16.38■□□□□ 0.21
PAX6-249ENST00000639034 COL3A1P02461 1466 aaPredicted RBP16.37■□□□□ 0.21
PAX6-249ENST00000639034 CYP27B1O15528 508 aa16.37■□□□□ 0.21
PAX6-249ENST00000639034 SULT6B1Q6IMI4 303 aa16.37■□□□□ 0.21
PAX6-249ENST00000639034 PRKRIP1Q9H875 184 aaPredicted RBP16.37■□□□□ 0.21
PAX6-249ENST00000639034 PPP2R1AP30153 589 aa16.35■□□□□ 0.21
PAX6-249ENST00000639034 PRIM1P49642 420 aaKnown RBP16.35■□□□□ 0.21
PAX6-249ENST00000639034 AMOTQ4VCS5 1084 aa16.35■□□□□ 0.21
PAX6-249ENST00000639034 PLEKHO1Q53GL0 409 aaPredicted RBP16.35■□□□□ 0.21
PAX6-249ENST00000639034 AEBP1Q8IUX7 1158 aa16.35■□□□□ 0.21
PAX6-249ENST00000639034 IFNL2Q8IZJ0 200 aa16.35■□□□□ 0.21
PAX6-249ENST00000639034 MIER1Q8N108 512 aa16.34■□□□□ 0.21
PAX6-249ENST00000639034 NBPF14Q5TI25 921 aa16.34■□□□□ 0.21
PAX6-249ENST00000639034 TOGARAM1Q9Y4F4 1720 aa16.33■□□□□ 0.2
PAX6-249ENST00000639034 PHKG2P15735 406 aa16.33■□□□□ 0.2
PAX6-249ENST00000639034 NKX1-1Q15270 411 aaPredicted RBP16.33■□□□□ 0.2
PAX6-249ENST00000639034 RALBP1Q15311 655 aa16.33■□□□□ 0.2
PAX6-249ENST00000639034 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
PAX6-249ENST00000639034 HSP90AB1P08238 724 aaKnown RBP16.32■□□□□ 0.2
PAX6-249ENST00000639034 TXNRD1Q16881 649 aa16.32■□□□□ 0.2
PAX6-249ENST00000639034 HMOX1P09601 288 aa16.31■□□□□ 0.2
PAX6-249ENST00000639034 ZNF530Q6P9A1 599 aaPredicted RBP16.31■□□□□ 0.2
PAX6-249ENST00000639034 NUDCQ9Y266 331 aa16.31■□□□□ 0.2
PAX6-249ENST00000639034 ITGB4P16144 1822 aa16.31■□□□□ 0.2
PAX6-249ENST00000639034 CCDC184Q52MB2 194 aa16.3■□□□□ 0.2
PAX6-249ENST00000639034 C1orf141Q5JVX7 400 aa16.3■□□□□ 0.2
PAX6-249ENST00000639034 MYBBP1AQ9BQG0 1328 aaKnown RBP16.29■□□□□ 0.2
PAX6-249ENST00000639034 PSDA5PKW4 1024 aaPredicted RBP16.29■□□□□ 0.2
PAX6-249ENST00000639034 R3HDM1Q15032 1099 aaKnown RBP16.29■□□□□ 0.2
PAX6-249ENST00000639034 MPRIPQ6WCQ1 1025 aa16.29■□□□□ 0.2
PAX6-249ENST00000639034 PROM2Q8N271 834 aa16.29■□□□□ 0.2
PAX6-249ENST00000639034 DCAF5Q96JK2 942 aa16.29■□□□□ 0.2
PAX6-249ENST00000639034 LY75O60449 1722 aa16.28■□□□□ 0.2
PAX6-249ENST00000639034 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
PAX6-249ENST00000639034 TMOD3Q9NYL9 352 aa16.28■□□□□ 0.2
PAX6-249ENST00000639034 ERVV-2B6SEH9 535 aa16.26■□□□□ 0.19
PAX6-249ENST00000639034 SMARCC1Q92922 1105 aaPredicted RBP16.26■□□□□ 0.19
PAX6-249ENST00000639034 PAPPAQ13219 1627 aa16.25■□□□□ 0.19
PAX6-249ENST00000639034 PALLDQ8WX93 1383 aa16.25■□□□□ 0.19
PAX6-249ENST00000639034 U2AF1L5P0DN76 240 aaPredicted RBP16.25■□□□□ 0.19
PAX6-249ENST00000639034 HMGB2P26583 209 aaKnown RBP16.25■□□□□ 0.19
PAX6-249ENST00000639034 U2AF1Q01081 240 aaKnown RBP eCLIP16.25■□□□□ 0.19
PAX6-249ENST00000639034 AKAP4Q5JQC9 854 aa16.25■□□□□ 0.19
PAX6-249ENST00000639034 STK32BQ9NY57 414 aa16.25■□□□□ 0.19
PAX6-249ENST00000639034 KDM6AO15550 1401 aaPredicted RBP16.25■□□□□ 0.19
PAX6-249ENST00000639034 PIGBQ92521 554 aa16.24■□□□□ 0.19
PAX6-249ENST00000639034 ANO8Q9HCE9 1232 aaPredicted RBP16.24■□□□□ 0.19
PAX6-249ENST00000639034 SRCAPQ6ZRS2 3230 aa16.24■□□□□ 0.19
PAX6-249ENST00000639034 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
PAX6-249ENST00000639034 CCNL1Q9UK58 526 aaPredicted RBP16.23■□□□□ 0.19
PAX6-249ENST00000639034 SCN11AQ9UI33 1791 aa16.23■□□□□ 0.19
PAX6-249ENST00000639034 CABP4P57796 275 aa16.22■□□□□ 0.19
PAX6-249ENST00000639034 MTHFSDQ2M296 383 aaKnown RBP16.22■□□□□ 0.19
PAX6-249ENST00000639034 GAS2L2Q8NHY3 880 aa16.22■□□□□ 0.19
PAX6-249ENST00000639034 RSPH6AQ9H0K4 717 aa16.22■□□□□ 0.19
PAX6-249ENST00000639034 LRRC4BQ9NT99 713 aa16.22■□□□□ 0.19
PAX6-249ENST00000639034 FCHSD2O94868 740 aa16.21■□□□□ 0.19
PAX6-249ENST00000639034 PRKAR2BP31323 418 aa16.21■□□□□ 0.19
PAX6-249ENST00000639034 SLC15A2Q16348 729 aa16.21■□□□□ 0.19
PAX6-249ENST00000639034 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.18
PAX6-249ENST00000639034 C5P01031 1676 aa16.21■□□□□ 0.18
PAX6-249ENST00000639034 LRP5O75197 1615 aa16.2■□□□□ 0.18
PAX6-249ENST00000639034 VIRMAQ69YN4 1812 aaKnown RBP16.2■□□□□ 0.18
PAX6-249ENST00000639034 MAP3K5Q99683 1374 aa16.19■□□□□ 0.18
PAX6-249ENST00000639034 NEFMP07197 916 aa16.19■□□□□ 0.18
PAX6-249ENST00000639034 ADAMTS7Q9UKP4 1686 aa16.19■□□□□ 0.18
PAX6-249ENST00000639034 MRC1P22897 1456 aa16.19■□□□□ 0.18
PAX6-249ENST00000639034 FAM9BQ8IZU0 186 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms