RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TATP17735 454 aaPredicted RBP29.54■■■□□ 2.32
SCN1B-206ENST00000638536 IL13P35225 146 aa29.54■■■□□ 2.32
SCN1B-206ENST00000638536 EN1Q05925 392 aaPredicted RBP29.54■■■□□ 2.32
SCN1B-206ENST00000638536 IGSF1Q8N6C5 1336 aa29.54■■■□□ 2.32
SCN1B-206ENST00000638536 KCNQ2O43526 872 aa29.52■■■□□ 2.32
SCN1B-206ENST00000638536 APBA3O96018 575 aa29.52■■■□□ 2.32
SCN1B-206ENST00000638536 ACSBG1Q96GR2 724 aa29.52■■■□□ 2.32
SCN1B-206ENST00000638536 BAG6P46379 1132 aa29.5■■■□□ 2.31
SCN1B-206ENST00000638536 AEBP1Q8IUX7 1158 aa29.5■■■□□ 2.31
SCN1B-206ENST00000638536 PKD1L3Q7Z443 1732 aa29.5■■■□□ 2.31
SCN1B-206ENST00000638536 PPP2R1AP30153 589 aa29.48■■■□□ 2.31
SCN1B-206ENST00000638536 EZH2Q15910 746 aaKnown RBP29.48■■■□□ 2.31
SCN1B-206ENST00000638536 COL3A1P02461 1466 aaPredicted RBP29.48■■■□□ 2.31
SCN1B-206ENST00000638536 BCL11BQ9C0K0 894 aaPredicted RBP29.47■■■□□ 2.31
SCN1B-206ENST00000638536 CAMKK2Q96RR4 588 aa29.46■■■□□ 2.31
SCN1B-206ENST00000638536 NHSQ6T4R5 1651 aa29.46■■■□□ 2.31
SCN1B-206ENST00000638536 CYP27B1O15528 508 aa29.45■■■□□ 2.31
SCN1B-206ENST00000638536 SULT6B1Q6IMI4 303 aa29.44■■■□□ 2.3
SCN1B-206ENST00000638536 DOT1LQ8TEK3 1739 aa29.43■■■□□ 2.3
SCN1B-206ENST00000638536 PARD3Q8TEW0 1356 aa29.43■■■□□ 2.3
SCN1B-206ENST00000638536 DIAPH1O60610 1272 aaKnown RBP29.42■■■□□ 2.3
SCN1B-206ENST00000638536 PCDH11XQ9BZA7 1347 aa29.42■■■□□ 2.3
SCN1B-206ENST00000638536 PCDH11YQ9BZA8 1340 aa29.42■■■□□ 2.3
SCN1B-206ENST00000638536 BTAF1O14981 1849 aa29.41■■■□□ 2.3
SCN1B-206ENST00000638536 KDRP35968 1356 aa29.39■■■□□ 2.3
SCN1B-206ENST00000638536 HMOX1P09601 288 aa29.39■■■□□ 2.3
SCN1B-206ENST00000638536 SRCAPQ6ZRS2 3230 aa29.39■■■□□ 2.3
SCN1B-206ENST00000638536 PRIM1P49642 420 aaKnown RBP29.38■■■□□ 2.29
SCN1B-206ENST00000638536 SPG7Q9UQ90 795 aa29.38■■■□□ 2.29
SCN1B-206ENST00000638536 RREB1Q92766 1687 aa29.37■■■□□ 2.29
SCN1B-206ENST00000638536 ZNF316A6NFI3 1004 aaPredicted RBP29.37■■■□□ 2.29
SCN1B-206ENST00000638536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.37■■■□□ 2.29
SCN1B-206ENST00000638536 TOGARAM1Q9Y4F4 1720 aa29.37■■■□□ 2.29
SCN1B-206ENST00000638536 PLSCR1O15162 318 aa29.35■■■□□ 2.29
SCN1B-206ENST00000638536 PROM2Q8N271 834 aa29.35■■■□□ 2.29
SCN1B-206ENST00000638536 SYTL4Q96C24 671 aaPredicted RBP29.35■■■□□ 2.29
SCN1B-206ENST00000638536 NUP188Q5SRE5 1749 aa29.34■■■□□ 2.29
SCN1B-206ENST00000638536 ITGB4P16144 1822 aa29.34■■■□□ 2.29
SCN1B-206ENST00000638536 RGPD3A6NKT7 1758 aaPredicted RBP29.34■■■□□ 2.29
SCN1B-206ENST00000638536 RGPD4Q7Z3J3 1758 aa29.34■■■□□ 2.29
SCN1B-206ENST00000638536 U2SURPO15042 1029 aaKnown RBP29.33■■■□□ 2.29
SCN1B-206ENST00000638536 PHKG2P15735 406 aa29.33■■■□□ 2.29
SCN1B-206ENST00000638536 NKX1-1Q15270 411 aaPredicted RBP29.31■■■□□ 2.28
SCN1B-206ENST00000638536 PLEKHO1Q53GL0 409 aaPredicted RBP29.3■■■□□ 2.28
SCN1B-206ENST00000638536 IFNL2Q8IZJ0 200 aa29.3■■■□□ 2.28
SCN1B-206ENST00000638536 CFAP53Q96M91 514 aa29.3■■■□□ 2.28
SCN1B-206ENST00000638536 PLEKHG2Q9H7P9 1386 aa29.28■■■□□ 2.28
SCN1B-206ENST00000638536 RALBP1Q15311 655 aa29.27■■■□□ 2.28
SCN1B-206ENST00000638536 ZNF530Q6P9A1 599 aaPredicted RBP29.27■■■□□ 2.28
SCN1B-206ENST00000638536 TXNRD1Q16881 649 aa29.26■■■□□ 2.27
SCN1B-206ENST00000638536 AMOTQ4VCS5 1084 aa29.26■■■□□ 2.27
SCN1B-206ENST00000638536 MPRIPQ6WCQ1 1025 aa29.25■■■□□ 2.27
SCN1B-206ENST00000638536 PSDA5PKW4 1024 aaPredicted RBP29.23■■■□□ 2.27
SCN1B-206ENST00000638536 KDM6AO15550 1401 aaPredicted RBP29.22■■■□□ 2.27
SCN1B-206ENST00000638536 MTHFSDQ2M296 383 aaKnown RBP29.21■■■□□ 2.27
SCN1B-206ENST00000638536 PIGBQ92521 554 aa29.21■■■□□ 2.27
SCN1B-206ENST00000638536 VIRMAQ69YN4 1812 aaKnown RBP29.21■■■□□ 2.27
SCN1B-206ENST00000638536 LY75O60449 1722 aa29.21■■■□□ 2.27
SCN1B-206ENST00000638536 KCNQ4P56696 695 aa29.2■■■□□ 2.27
SCN1B-206ENST00000638536 RSPH6AQ9H0K4 717 aa29.2■■■□□ 2.27
SCN1B-206ENST00000638536 PRKRIP1Q9H875 184 aaPredicted RBP29.2■■■□□ 2.27
SCN1B-206ENST00000638536 LRRC4BQ9NT99 713 aa29.2■■■□□ 2.27
SCN1B-206ENST00000638536 U2AF1L5P0DN76 240 aaPredicted RBP29.2■■■□□ 2.26
SCN1B-206ENST00000638536 U2AF1Q01081 240 aaKnown RBP eCLIP29.2■■■□□ 2.26
SCN1B-206ENST00000638536 R3HDM1Q15032 1099 aaKnown RBP29.2■■■□□ 2.26
SCN1B-206ENST00000638536 ANO8Q9HCE9 1232 aaPredicted RBP29.2■■■□□ 2.26
SCN1B-206ENST00000638536 NUDCQ9Y266 331 aa29.2■■■□□ 2.26
SCN1B-206ENST00000638536 MYBBP1AQ9BQG0 1328 aaKnown RBP29.18■■■□□ 2.26
SCN1B-206ENST00000638536 PHACTR3Q96KR7 559 aa29.18■■■□□ 2.26
SCN1B-206ENST00000638536 PRKAR2BP31323 418 aa29.17■■■□□ 2.26
SCN1B-206ENST00000638536 C1orf141Q5JVX7 400 aa29.17■■■□□ 2.26
SCN1B-206ENST00000638536 SCN11AQ9UI33 1791 aa29.17■■■□□ 2.26
SCN1B-206ENST00000638536 DCAF5Q96JK2 942 aa29.16■■■□□ 2.26
SCN1B-206ENST00000638536 AKAP4Q5JQC9 854 aa29.14■■■□□ 2.26
SCN1B-206ENST00000638536 HSP90AB1P08238 724 aaKnown RBP29.13■■■□□ 2.25
SCN1B-206ENST00000638536 LGR6Q9HBX8 967 aa29.13■■■□□ 2.25
SCN1B-206ENST00000638536 TMOD3Q9NYL9 352 aa29.13■■■□□ 2.25
SCN1B-206ENST00000638536 PAPPAQ13219 1627 aa29.13■■■□□ 2.25
SCN1B-206ENST00000638536 ERVV-2B6SEH9 535 aa29.12■■■□□ 2.25
SCN1B-206ENST00000638536 NBPF14Q5TI25 921 aa29.12■■■□□ 2.25
SCN1B-206ENST00000638536 ASAP1Q9ULH1 1129 aa29.12■■■□□ 2.25
SCN1B-206ENST00000638536 PALLDQ8WX93 1383 aa29.1■■■□□ 2.25
SCN1B-206ENST00000638536 FCHSD2O94868 740 aa29.1■■■□□ 2.25
SCN1B-206ENST00000638536 SLC27A3Q5K4L6 730 aa29.08■■■□□ 2.25
SCN1B-206ENST00000638536 NFATC2IPQ8NCF5 419 aa29.08■■■□□ 2.25
SCN1B-206ENST00000638536 ATG3Q9NT62 314 aa29.08■■■□□ 2.25
SCN1B-206ENST00000638536 ADAMTS7Q9UKP4 1686 aa29.07■■■□□ 2.24
SCN1B-206ENST00000638536 CABP4P57796 275 aa29.07■■■□□ 2.24
SCN1B-206ENST00000638536 CCNL1Q9UK58 526 aaPredicted RBP29.07■■■□□ 2.24
SCN1B-206ENST00000638536 RNMTO43148 476 aaKnown RBP29.06■■■□□ 2.24
SCN1B-206ENST00000638536 ZNF827Q17R98 1081 aa29.06■■■□□ 2.24
SCN1B-206ENST00000638536 PDGFDQ9GZP0 370 aaPredicted RBP29.06■■■□□ 2.24
SCN1B-206ENST00000638536 TAF1LQ8IZX4 1826 aa29.06■■■□□ 2.24
SCN1B-206ENST00000638536 SLC15A2Q16348 729 aa29.05■■■□□ 2.24
SCN1B-206ENST00000638536 GAS2L2Q8NHY3 880 aa29.05■■■□□ 2.24
SCN1B-206ENST00000638536 PLEKHF1Q96S99 279 aa29.04■■■□□ 2.24
SCN1B-206ENST00000638536 IL17REQ8NFR9 667 aa29.03■■■□□ 2.24
SCN1B-206ENST00000638536 SMARCC1Q92922 1105 aaPredicted RBP29.03■■■□□ 2.24
SCN1B-206ENST00000638536 STK32BQ9NY57 414 aa29.02■■■□□ 2.24
SCN1B-206ENST00000638536 MAP3K5Q99683 1374 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms