RNA–Protein interactions for RNA: ENST00000638133.1

PPFIA1-225, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-225ENST00000638133 RGPD4Q7Z3J3 1758 aa20.36■□□□□ 0.85
PPFIA1-225ENST00000638133 POLKQ9UBT6 870 aa20.36■□□□□ 0.85
PPFIA1-225ENST00000638133 NHSQ6T4R5 1651 aa20.35■□□□□ 0.85
PPFIA1-225ENST00000638133 KCNQ2O43526 872 aa20.35■□□□□ 0.85
PPFIA1-225ENST00000638133 PTF1AQ7RTS3 328 aa20.35■□□□□ 0.85
PPFIA1-225ENST00000638133 MEGF6O75095 1541 aa20.35■□□□□ 0.85
PPFIA1-225ENST00000638133 NUP188Q5SRE5 1749 aa20.35■□□□□ 0.85
PPFIA1-225ENST00000638133 SYTL4Q96C24 671 aaPredicted RBP20.33■□□□□ 0.85
PPFIA1-225ENST00000638133 PCDH11XQ9BZA7 1347 aa20.3■□□□□ 0.84
PPFIA1-225ENST00000638133 PCDH11YQ9BZA8 1340 aa20.3■□□□□ 0.84
PPFIA1-225ENST00000638133 TXNRD1Q16881 649 aa20.29■□□□□ 0.84
PPFIA1-225ENST00000638133 BTAF1O14981 1849 aa20.29■□□□□ 0.84
PPFIA1-225ENST00000638133 SHANK3Q9BYB0 1731 aa20.28■□□□□ 0.84
PPFIA1-225ENST00000638133 EIF4A2Q14240 407 aaKnown RBP20.28■□□□□ 0.84
PPFIA1-225ENST00000638133 EYA1Q99502 592 aa20.28■□□□□ 0.84
PPFIA1-225ENST00000638133 DOT1LQ8TEK3 1739 aa20.27■□□□□ 0.84
PPFIA1-225ENST00000638133 AMER1Q5JTC6 1135 aaPredicted RBP20.27■□□□□ 0.84
PPFIA1-225ENST00000638133 SPG7Q9UQ90 795 aa20.27■□□□□ 0.84
PPFIA1-225ENST00000638133 PRIM1P49642 420 aaKnown RBP20.26■□□□□ 0.83
PPFIA1-225ENST00000638133 CC2D1BQ5T0F9 858 aaKnown RBP20.26■□□□□ 0.83
PPFIA1-225ENST00000638133 PROM2Q8N271 834 aa20.25■□□□□ 0.83
PPFIA1-225ENST00000638133 STK32BQ9NY57 414 aa20.25■□□□□ 0.83
PPFIA1-225ENST00000638133 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
PPFIA1-225ENST00000638133 LRP5O75197 1615 aa20.24■□□□□ 0.83
PPFIA1-225ENST00000638133 NCAPD2Q15021 1401 aa20.22■□□□□ 0.83
PPFIA1-225ENST00000638133 PER1O15534 1290 aaPredicted RBP20.22■□□□□ 0.83
PPFIA1-225ENST00000638133 PKD1L3Q7Z443 1732 aa20.22■□□□□ 0.83
PPFIA1-225ENST00000638133 CYP27B1O15528 508 aa20.2■□□□□ 0.82
PPFIA1-225ENST00000638133 ANO8Q9HCE9 1232 aaPredicted RBP20.2■□□□□ 0.82
PPFIA1-225ENST00000638133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.2■□□□□ 0.822e-7■■□□□ 12.3
PPFIA1-225ENST00000638133 IGSF1Q8N6C5 1336 aa20.2■□□□□ 0.82
PPFIA1-225ENST00000638133 SLC15A2Q16348 729 aa20.19■□□□□ 0.82
PPFIA1-225ENST00000638133 SLC27A3Q5K4L6 730 aa20.19■□□□□ 0.82
PPFIA1-225ENST00000638133 MTHFSP49914 203 aa20.18■□□□□ 0.82
PPFIA1-225ENST00000638133 MPRIPQ6WCQ1 1025 aa20.18■□□□□ 0.82
PPFIA1-225ENST00000638133 IFNL2Q8IZJ0 200 aa20.18■□□□□ 0.82
PPFIA1-225ENST00000638133 PLEKHO1Q53GL0 409 aaPredicted RBP20.16■□□□□ 0.82
PPFIA1-225ENST00000638133 SPON1Q9HCB6 807 aa20.16■□□□□ 0.82
PPFIA1-225ENST00000638133 PLEKHG2Q9H7P9 1386 aa20.16■□□□□ 0.82
PPFIA1-225ENST00000638133 NPC1L1Q9UHC9 1359 aa20.16■□□□□ 0.82
PPFIA1-225ENST00000638133 SRCAPQ6ZRS2 3230 aa20.15■□□□□ 0.82
PPFIA1-225ENST00000638133 PPP1R1BQ9UD71 204 aaPredicted RBP20.15■□□□□ 0.82
PPFIA1-225ENST00000638133 PHKG2P15735 406 aa20.14■□□□□ 0.81
PPFIA1-225ENST00000638133 NKX1-1Q15270 411 aaPredicted RBP20.14■□□□□ 0.81
PPFIA1-225ENST00000638133 AMOTQ4VCS5 1084 aa20.14■□□□□ 0.81
PPFIA1-225ENST00000638133 SULT6B1Q6IMI4 303 aa20.14■□□□□ 0.81
PPFIA1-225ENST00000638133 CCNL1Q9UK58 526 aaPredicted RBP20.14■□□□□ 0.81
PPFIA1-225ENST00000638133 HMGB2P26583 209 aaKnown RBP20.13■□□□□ 0.81
PPFIA1-225ENST00000638133 LRRC4BQ9NT99 713 aa20.13■□□□□ 0.81
PPFIA1-225ENST00000638133 LY75O60449 1722 aa20.13■□□□□ 0.81
PPFIA1-225ENST00000638133 ITGB4P16144 1822 aa20.12■□□□□ 0.81
PPFIA1-225ENST00000638133 DIAPH1O60610 1272 aaKnown RBP20.12■□□□□ 0.81
PPFIA1-225ENST00000638133 HSP90AB1P08238 724 aaKnown RBP20.12■□□□□ 0.81
PPFIA1-225ENST00000638133 IL13P35225 146 aa20.12■□□□□ 0.81
PPFIA1-225ENST00000638133 AEBP1Q8IUX7 1158 aa20.12■□□□□ 0.81
PPFIA1-225ENST00000638133 SMARCC1Q92922 1105 aaPredicted RBP20.12■□□□□ 0.81
PPFIA1-225ENST00000638133 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
PPFIA1-225ENST00000638133 TOGARAM1Q9Y4F4 1720 aa20.11■□□□□ 0.81
PPFIA1-225ENST00000638133 C1orf141Q5JVX7 400 aa20.11■□□□□ 0.81
PPFIA1-225ENST00000638133 ZNF530Q6P9A1 599 aaPredicted RBP20.11■□□□□ 0.81
PPFIA1-225ENST00000638133 PAPPAQ13219 1627 aa20.11■□□□□ 0.81
PPFIA1-225ENST00000638133 ZBTB7AO95365 584 aa20.1■□□□□ 0.81
PPFIA1-225ENST00000638133 KCNQ4P56696 695 aa20.1■□□□□ 0.81
PPFIA1-225ENST00000638133 TFCP2L1Q9NZI6 479 aa20.1■□□□□ 0.81
PPFIA1-225ENST00000638133 CASZ1Q86V15 1759 aa20.1■□□□□ 0.81
PPFIA1-225ENST00000638133 PALLDQ8WX93 1383 aa20.09■□□□□ 0.81
PPFIA1-225ENST00000638133 ZNF827Q17R98 1081 aa20.09■□□□□ 0.81
PPFIA1-225ENST00000638133 PIGBQ92521 554 aa20.08■□□□□ 0.81
PPFIA1-225ENST00000638133 CFAP53Q96M91 514 aa20.08■□□□□ 0.81
PPFIA1-225ENST00000638133 PDGFDQ9GZP0 370 aaPredicted RBP20.08■□□□□ 0.81
PPFIA1-225ENST00000638133 HMOX1P09601 288 aa20.07■□□□□ 0.8
PPFIA1-225ENST00000638133 DCAF5Q96JK2 942 aa20.07■□□□□ 0.8
PPFIA1-225ENST00000638133 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
PPFIA1-225ENST00000638133 KDRP35968 1356 aa20.07■□□□□ 0.8
PPFIA1-225ENST00000638133 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
PPFIA1-225ENST00000638133 AKT1S1Q96B36 256 aa20.06■□□□□ 0.8
PPFIA1-225ENST00000638133 MTFR1LQ9H019 292 aa20.06■□□□□ 0.8
PPFIA1-225ENST00000638133 ERVV-2B6SEH9 535 aa20.05■□□□□ 0.8
PPFIA1-225ENST00000638133 CABP4P57796 275 aa20.04■□□□□ 0.8
PPFIA1-225ENST00000638133 C5P01031 1676 aa20.03■□□□□ 0.8
PPFIA1-225ENST00000638133 MSH5O43196 834 aa20.03■□□□□ 0.8
PPFIA1-225ENST00000638133 QSER1Q2KHR3 1735 aa20.02■□□□□ 0.8
PPFIA1-225ENST00000638133 SLC16A10Q8TF71 515 aa20.01■□□□□ 0.79
PPFIA1-225ENST00000638133 ASAP1Q9ULH1 1129 aa20.01■□□□□ 0.79
PPFIA1-225ENST00000638133 NUDCQ9Y266 331 aa20.01■□□□□ 0.79
PPFIA1-225ENST00000638133 AKAP4Q5JQC9 854 aa20■□□□□ 0.79
PPFIA1-225ENST00000638133 AK7Q96M32 723 aa20■□□□□ 0.79
PPFIA1-225ENST00000638133 PNPLA7Q6ZV29 1317 aa20■□□□□ 0.79
PPFIA1-225ENST00000638133 LOC102724428A0A0B4J2F2 783 aa19.99■□□□□ 0.79
PPFIA1-225ENST00000638133 DCAF8L1A6NGE4 600 aa19.99■□□□□ 0.79
PPFIA1-225ENST00000638133 PPP2R1AP30153 589 aa19.99■□□□□ 0.79
PPFIA1-225ENST00000638133 ATP6V1AP38606 617 aa19.99■□□□□ 0.79
PPFIA1-225ENST00000638133 SIK1P57059 783 aa19.99■□□□□ 0.79
PPFIA1-225ENST00000638133 TAF1LQ8IZX4 1826 aa19.99■□□□□ 0.79
PPFIA1-225ENST00000638133 COL3A1P02461 1466 aaPredicted RBP19.99■□□□□ 0.79
PPFIA1-225ENST00000638133 TUBGCP6Q96RT7 1819 aa19.98■□□□□ 0.79
PPFIA1-225ENST00000638133 POLD1P28340 1107 aa19.98■□□□□ 0.79
PPFIA1-225ENST00000638133 FLAD1Q8NFF5 587 aa19.98■□□□□ 0.79
PPFIA1-225ENST00000638133 RBM42Q9BTD8 480 aaKnown RBP19.98■□□□□ 0.79
PPFIA1-225ENST00000638133 ATG3Q9NT62 314 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms