RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 RGPD2P0DJD1 1756 aa27.81■■■□□ 2.04
CLN6-222ENST00000637667 CASZ1Q86V15 1759 aa27.81■■■□□ 2.04
CLN6-222ENST00000637667 BTAF1O14981 1849 aa27.81■■■□□ 2.04
CLN6-222ENST00000637667 RAPGEF4Q8WZA2 1011 aa27.81■■■□□ 2.04
CLN6-222ENST00000637667 CGNL1Q0VF96 1302 aa27.81■■■□□ 2.04
CLN6-222ENST00000637667 ZBTB7AO95365 584 aa27.8■■■□□ 2.04
CLN6-222ENST00000637667 EMILIN1Q9Y6C2 1016 aa27.8■■■□□ 2.04
CLN6-222ENST00000637667 HSPA5P11021 654 aaKnown RBP27.79■■■□□ 2.04
CLN6-222ENST00000637667 PRIM1P49642 420 aaKnown RBP27.79■■■□□ 2.04
CLN6-222ENST00000637667 SYTL4Q96C24 671 aaPredicted RBP27.79■■■□□ 2.04
CLN6-222ENST00000637667 TATP17735 454 aaPredicted RBP27.77■■■□□ 2.04
CLN6-222ENST00000637667 LRRC4BQ9NT99 713 aa27.77■■■□□ 2.04
CLN6-222ENST00000637667 PPM1GO15355 546 aaPredicted RBP27.75■■■□□ 2.03
CLN6-222ENST00000637667 SLC27A3Q5K4L6 730 aa27.75■■■□□ 2.03
CLN6-222ENST00000637667 PAPPAQ13219 1627 aa27.74■■■□□ 2.03
CLN6-222ENST00000637667 ATF5Q9Y2D1 282 aaPredicted RBP27.74■■■□□ 2.03
CLN6-222ENST00000637667 NSD2O96028 1365 aa27.73■■■□□ 2.03
CLN6-222ENST00000637667 SHANK3Q9BYB0 1731 aa27.73■■■□□ 2.03
CLN6-222ENST00000637667 PTGER2P43116 358 aa27.73■■■□□ 2.03
CLN6-222ENST00000637667 ZNF827Q17R98 1081 aa27.73■■■□□ 2.03
CLN6-222ENST00000637667 MTFR1LQ9H019 292 aa27.71■■■□□ 2.03
CLN6-222ENST00000637667 WASHC2AQ641Q2 1341 aa27.7■■■□□ 2.03
CLN6-222ENST00000637667 PCDH11XQ9BZA7 1347 aa27.7■■■□□ 2.03
CLN6-222ENST00000637667 PCDH11YQ9BZA8 1340 aa27.7■■■□□ 2.03
CLN6-222ENST00000637667 DOT1LQ8TEK3 1739 aa27.7■■■□□ 2.03
CLN6-222ENST00000637667 POLKQ9UBT6 870 aa27.69■■■□□ 2.02
CLN6-222ENST00000637667 AKT1S1Q96B36 256 aa27.68■■■□□ 2.02
CLN6-222ENST00000637667 KCNQ4P56696 695 aa27.67■■■□□ 2.02
CLN6-222ENST00000637667 PANK3Q9H999 370 aa27.67■■■□□ 2.02
CLN6-222ENST00000637667 NCAPD2Q15021 1401 aa27.67■■■□□ 2.02
CLN6-222ENST00000637667 ANKRD26Q9UPS8 1709 aa27.65■■■□□ 2.02
CLN6-222ENST00000637667 CYP27B1O15528 508 aa27.65■■■□□ 2.02
CLN6-222ENST00000637667 TNNT2P45379 298 aaPredicted RBP27.65■■■□□ 2.02
CLN6-222ENST00000637667 SGIP1Q9BQI5 828 aa27.65■■■□□ 2.02
CLN6-222ENST00000637667 EYA1Q99502 592 aa27.64■■■□□ 2.02
CLN6-222ENST00000637667 CCNL1Q9UK58 526 aaPredicted RBP27.63■■■□□ 2.01
CLN6-222ENST00000637667 DCAF8L1A6NGE4 600 aa27.61■■■□□ 2.01
CLN6-222ENST00000637667 TFCP2L1Q9NZI6 479 aa27.61■■■□□ 2.01
CLN6-222ENST00000637667 MAP2P11137 1827 aaKnown RBP27.6■■■□□ 2.01
CLN6-222ENST00000637667 SPG7Q9UQ90 795 aa27.59■■■□□ 2.01
CLN6-222ENST00000637667 PNPLA7Q6ZV29 1317 aa27.59■■■□□ 2.01
CLN6-222ENST00000637667 LY75O60449 1722 aa27.58■■■□□ 2.01
CLN6-222ENST00000637667 EIF4A2Q14240 407 aaKnown RBP27.58■■■□□ 2.01
CLN6-222ENST00000637667 SLC16A10Q8TF71 515 aa27.58■■■□□ 2.01
CLN6-222ENST00000637667 FHDC1Q9C0D6 1143 aaPredicted RBP27.58■■■□□ 2.01
CLN6-222ENST00000637667 MPRIPQ6WCQ1 1025 aa27.57■■■□□ 2
CLN6-222ENST00000637667 ARXQ96QS3 562 aa27.57■■■□□ 2
CLN6-222ENST00000637667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.57■■■□□ 2
CLN6-222ENST00000637667 PKD1L3Q7Z443 1732 aa27.56■■■□□ 2
CLN6-222ENST00000637667 NKX1-1Q15270 411 aaPredicted RBP27.56■■■□□ 2
CLN6-222ENST00000637667 SYT17Q9BSW7 474 aa27.56■■■□□ 2
CLN6-222ENST00000637667 PALLDQ8WX93 1383 aa27.54■■■□□ 2
CLN6-222ENST00000637667 MORC1Q86VD1 984 aa27.53■■■□□ 2
CLN6-222ENST00000637667 QSER1Q2KHR3 1735 aa27.53■■■□□ 2
CLN6-222ENST00000637667 KNSTRNQ9Y448 316 aa27.52■■■□□ 2
CLN6-222ENST00000637667 YY1P25490 414 aa27.51■■□□□ 1.99
CLN6-222ENST00000637667 PIGBQ92521 554 aa27.51■■□□□ 1.99
CLN6-222ENST00000637667 SMARCC1Q92922 1105 aaPredicted RBP27.51■■□□□ 1.99
CLN6-222ENST00000637667 TOGARAM1Q9Y4F4 1720 aa27.5■■□□□ 1.99
CLN6-222ENST00000637667 MAP3K5Q99683 1374 aa27.49■■□□□ 1.99
CLN6-222ENST00000637667 IGSF1Q8N6C5 1336 aa27.49■■□□□ 1.99
CLN6-222ENST00000637667 HMGB2P26583 209 aaKnown RBP27.49■■□□□ 1.99
CLN6-222ENST00000637667 POLD1P28340 1107 aa27.49■■□□□ 1.99
CLN6-222ENST00000637667 IFNL2Q8IZJ0 200 aa27.49■■□□□ 1.99
CLN6-222ENST00000637667 PHKG2P15735 406 aa27.48■■□□□ 1.99
CLN6-222ENST00000637667 TUBGCP6Q96RT7 1819 aa27.48■■□□□ 1.99
CLN6-222ENST00000637667 PLEKHG2Q9H7P9 1386 aa27.48■■□□□ 1.99
CLN6-222ENST00000637667 KIF7Q2M1P5 1343 aa27.47■■□□□ 1.99
CLN6-222ENST00000637667 COL23A1Q86Y22 540 aaPredicted RBP27.47■■□□□ 1.99
CLN6-222ENST00000637667 MSH5O43196 834 aa27.45■■□□□ 1.98
CLN6-222ENST00000637667 TMOD3Q9NYL9 352 aa27.45■■□□□ 1.98
CLN6-222ENST00000637667 AMER1Q5JTC6 1135 aaPredicted RBP27.44■■□□□ 1.98
CLN6-222ENST00000637667 ITGB4P16144 1822 aa27.44■■□□□ 1.98
CLN6-222ENST00000637667 C5P01031 1676 aa27.41■■□□□ 1.98
CLN6-222ENST00000637667 KLHL34Q8N239 644 aa27.41■■□□□ 1.98
CLN6-222ENST00000637667 FLAD1Q8NFF5 587 aa27.41■■□□□ 1.98
CLN6-222ENST00000637667 LOC102724428A0A0B4J2F2 783 aa27.4■■□□□ 1.98
CLN6-222ENST00000637667 SIK1P57059 783 aa27.4■■□□□ 1.98
CLN6-222ENST00000637667 PLEKHO1Q53GL0 409 aaPredicted RBP27.4■■□□□ 1.98
CLN6-222ENST00000637667 ASAP1Q9ULH1 1129 aa27.4■■□□□ 1.98
CLN6-222ENST00000637667 COL24A1Q17RW2 1714 aa27.4■■□□□ 1.98
CLN6-222ENST00000637667 AK7Q96M32 723 aa27.39■■□□□ 1.98
CLN6-222ENST00000637667 AEBP1Q8IUX7 1158 aa27.38■■□□□ 1.97
CLN6-222ENST00000637667 HSP90AB1P08238 724 aaKnown RBP27.37■■□□□ 1.97
CLN6-222ENST00000637667 MSL1Q68DK7 614 aa27.37■■□□□ 1.97
CLN6-222ENST00000637667 ZNF530Q6P9A1 599 aaPredicted RBP27.37■■□□□ 1.97
CLN6-222ENST00000637667 AMOTQ4VCS5 1084 aa27.36■■□□□ 1.97
CLN6-222ENST00000637667 ATG3Q9NT62 314 aa27.36■■□□□ 1.97
CLN6-222ENST00000637667 TAF1LQ8IZX4 1826 aa27.36■■□□□ 1.97
CLN6-222ENST00000637667 ERVV-2B6SEH9 535 aa27.35■■□□□ 1.97
CLN6-222ENST00000637667 IL13P35225 146 aa27.35■■□□□ 1.97
CLN6-222ENST00000637667 DCAF5Q96JK2 942 aa27.35■■□□□ 1.97
CLN6-222ENST00000637667 C4BP0C0L5 1744 aa27.35■■□□□ 1.97
CLN6-222ENST00000637667 SULT6B1Q6IMI4 303 aa27.34■■□□□ 1.97
CLN6-222ENST00000637667 AMIGO3Q86WK7 504 aa27.34■■□□□ 1.97
CLN6-222ENST00000637667 LINC00116Q8NCU8 138 aa27.34■■□□□ 1.97
CLN6-222ENST00000637667 PER1O15534 1290 aaPredicted RBP27.33■■□□□ 1.97
CLN6-222ENST00000637667 ITPK1Q13572 414 aa27.32■■□□□ 1.96
CLN6-222ENST00000637667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.31■■□□□ 1.96
CLN6-222ENST00000637667 PHF14O94880 888 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms