RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 CCT4P50991 539 aaKnown RBP6.84□□□□□ -1.31
CHD2-227ENST00000637572 EXOSC9Q06265 439 aaKnown RBP6.84□□□□□ -1.31
CHD2-227ENST00000637572 RIC3Q7Z5B4 369 aa6.84□□□□□ -1.31
CHD2-227ENST00000637572 EMILIN1Q9Y6C2 1016 aa6.84□□□□□ -1.31
CHD2-227ENST00000637572 A0A1W2PP64 1363 aa6.84□□□□□ -1.31
CHD2-227ENST00000637572 SYNMO15061 1565 aa6.84□□□□□ -1.32
CHD2-227ENST00000637572 SPATA31D1Q6ZQQ2 1576 aa6.84□□□□□ -1.32
CHD2-227ENST00000637572 DIP2CQ9Y2E4 1556 aa6.84□□□□□ -1.32
CHD2-227ENST00000637572 GPIHBP1Q8IV16 184 aa6.84□□□□□ -1.32
CHD2-227ENST00000637572 BCL2L13Q9BXK5 485 aa6.84□□□□□ -1.32
CHD2-227ENST00000637572 ARHGEF10O15013 1369 aa6.83□□□□□ -1.32
CHD2-227ENST00000637572 NCLP19338 710 aaKnown RBP6.83□□□□□ -1.32
CHD2-227ENST00000637572 SLFN5Q08AF3 891 aa6.83□□□□□ -1.32
CHD2-227ENST00000637572 CCDC27Q2M243 656 aa6.83□□□□□ -1.32
CHD2-227ENST00000637572 ALDH1L2Q3SY69 923 aa6.83□□□□□ -1.32
CHD2-227ENST00000637572 HDGFL1Q5TGJ6 251 aa6.83□□□□□ -1.32
CHD2-227ENST00000637572 NBPF14Q5TI25 921 aa6.83□□□□□ -1.32
CHD2-227ENST00000637572 COG6Q9Y2V7 657 aa6.83□□□□□ -1.32
CHD2-227ENST00000637572 FGD1P98174 961 aa6.83□□□□□ -1.32
CHD2-227ENST00000637572 TAF7Q15545 349 aaPredicted RBP6.83□□□□□ -1.32
CHD2-227ENST00000637572 ZMYM4Q5VZL5 1548 aa6.83□□□□□ -1.32
CHD2-227ENST00000637572 RNF17Q9BXT8 1623 aaKnown RBP6.83□□□□□ -1.32
CHD2-227ENST00000637572 C1QBPQ07021 282 aaKnown RBP6.83□□□□□ -1.32
CHD2-227ENST00000637572 KIF6Q6ZMV9 814 aa6.83□□□□□ -1.32
CHD2-227ENST00000637572 ARHGEF40Q8TER5 1519 aa6.82□□□□□ -1.32
CHD2-227ENST00000637572 PER1O15534 1290 aaPredicted RBP6.82□□□□□ -1.32
CHD2-227ENST00000637572 PPP1R37O75864 691 aa6.82□□□□□ -1.32
CHD2-227ENST00000637572 CRBNQ96SW2 442 aa6.82□□□□□ -1.32
CHD2-227ENST00000637572 KDM4CQ9H3R0 1056 aa6.82□□□□□ -1.32
CHD2-227ENST00000637572 ZC3H13Q5T200 1668 aaKnown RBP6.82□□□□□ -1.32
CHD2-227ENST00000637572 BTBD11A6QL63 1104 aa6.82□□□□□ -1.32
CHD2-227ENST00000637572 MKRN3Q13064 507 aaKnown RBP6.82□□□□□ -1.32
CHD2-227ENST00000637572 IFNL2Q8IZJ0 200 aa6.82□□□□□ -1.32
CHD2-227ENST00000637572 CHMP4CQ96CF2 233 aa6.82□□□□□ -1.32
CHD2-227ENST00000637572 UBTFL1P0CB47 393 aaPredicted RBP6.82□□□□□ -1.32
CHD2-227ENST00000637572 SMYD5Q6GMV2 418 aa6.82□□□□□ -1.32
CHD2-227ENST00000637572 POTEAQ6S8J7 498 aa6.82□□□□□ -1.32
CHD2-227ENST00000637572 TEX13AQ9BXU3 409 aaPredicted RBP6.82□□□□□ -1.32
CHD2-227ENST00000637572 TTLL12Q14166 644 aaPredicted RBP6.82□□□□□ -1.32
CHD2-227ENST00000637572 CHADLQ6NUI6 762 aa6.82□□□□□ -1.32
CHD2-227ENST00000637572 HSCBQ8IWL3 235 aa6.82□□□□□ -1.32
CHD2-227ENST00000637572 SOS1Q07889 1333 aaPredicted RBP6.81□□□□□ -1.32
CHD2-227ENST00000637572 LRRIQ1Q96JM4 1722 aa6.81□□□□□ -1.32
CHD2-227ENST00000637572 STARD3NLO95772 234 aa6.81□□□□□ -1.32
CHD2-227ENST00000637572 G3BP1Q13283 466 aaKnown RBP eCLIP6.81□□□□□ -1.32
CHD2-227ENST00000637572 ANKRD24Q8TF21 1146 aa6.81□□□□□ -1.32
CHD2-227ENST00000637572 CDCA7Q9BWT1 371 aaPredicted RBP6.81□□□□□ -1.32
CHD2-227ENST00000637572 ADGRB3O60242 1522 aa6.81□□□□□ -1.32
CHD2-227ENST00000637572 EXOC5O00471 708 aa6.81□□□□□ -1.32
CHD2-227ENST00000637572 ATF7IPQ6VMQ6 1270 aa6.81□□□□□ -1.32
CHD2-227ENST00000637572 EXOC6Q8TAG9 804 aa6.81□□□□□ -1.32
CHD2-227ENST00000637572 DDX54Q8TDD1 881 aaKnown RBP6.81□□□□□ -1.32
CHD2-227ENST00000637572 POLKQ9UBT6 870 aa6.81□□□□□ -1.32
CHD2-227ENST00000637572 ATP7BP35670 1465 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 IP6K1Q92551 441 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 NKTRP30414 1462 aaKnown RBP6.8□□□□□ -1.32
CHD2-227ENST00000637572 SPHKAPQ2M3C7 1700 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 GCP02774 474 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 ERC1Q8IUD2 1116 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 RUFY2Q8WXA3 655 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 CDCA7LQ96GN5 454 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 USP21Q9UK80 565 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 SBNO1A3KN83 1393 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 PLIN1O60240 522 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 CARD14Q9BXL6 1004 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 TMOD3Q9NYL9 352 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 ERC2O15083 957 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 ANKRD45Q5TZF3 282 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 SPDYE1Q8NFV5 336 aaPredicted RBP6.8□□□□□ -1.32
CHD2-227ENST00000637572 GCC1Q96CN9 775 aa6.8□□□□□ -1.32
CHD2-227ENST00000637572 ANKARQ7Z5J8 1434 aa6.79□□□□□ -1.32
CHD2-227ENST00000637572 MAP3K4Q9Y6R4 1608 aa6.79□□□□□ -1.32
CHD2-227ENST00000637572 KDM5AP29375 1690 aaKnown RBP6.79□□□□□ -1.32
CHD2-227ENST00000637572 TRIM6-TRIM34B2RNG4 842 aa6.79□□□□□ -1.32
CHD2-227ENST00000637572 G3V3G9 751 aa6.79□□□□□ -1.32
CHD2-227ENST00000637572 GPR162Q16538 588 aa6.79□□□□□ -1.32
CHD2-227ENST00000637572 ARHGEF1Q92888 912 aaKnown RBP6.79□□□□□ -1.32
CHD2-227ENST00000637572 RBM42Q9BTD8 480 aaKnown RBP6.79□□□□□ -1.32
CHD2-227ENST00000637572 SRCIN1Q9C0H9 1055 aa6.79□□□□□ -1.32
CHD2-227ENST00000637572 BABAM1Q9NWV8 329 aa6.79□□□□□ -1.32
CHD2-227ENST00000637572 METP08581 1390 aa6.79□□□□□ -1.32
CHD2-227ENST00000637572 GNAI2P04899 355 aa6.79□□□□□ -1.32
CHD2-227ENST00000637572 CCDC184Q52MB2 194 aa6.79□□□□□ -1.32
CHD2-227ENST00000637572 C1orf115Q9H7X2 142 aa6.79□□□□□ -1.32
CHD2-227ENST00000637572 IFIT2P09913 472 aaKnown RBP6.79□□□□□ -1.32
CHD2-227ENST00000637572 TSR2Q969E8 191 aaKnown RBP6.79□□□□□ -1.32
CHD2-227ENST00000637572 SLAIN2Q9P270 581 aa6.79□□□□□ -1.32
CHD2-227ENST00000637572 CLTCL1P53675 1640 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 KIF24Q5T7B8 1368 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 AKAP4Q5JQC9 854 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 CAMSAP1Q5T5Y3 1602 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 NECTIN2Q92692 538 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 FMNL2Q96PY5 1086 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 PTPRCP08575 1304 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 KIDINS220Q9ULH0 1771 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 MLLT3P42568 568 aaPredicted RBP6.78□□□□□ -1.32
CHD2-227ENST00000637572 FAM161AQ3B820 660 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 HSP90AB3PQ58FF7 597 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 ABCA6Q8N139 1617 aa6.78□□□□□ -1.32
CHD2-227ENST00000637572 FRAT2O75474 233 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms