RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CCDC61Q9Y6R9 512 aa18.07■□□□□ 0.48
CLN6-215ENST00000636674 KIAA0232Q92628 1395 aa18.07■□□□□ 0.48
CLN6-215ENST00000636674 CD2BP2O95400 341 aaKnown RBP18.06■□□□□ 0.48
CLN6-215ENST00000636674 GSPT1P15170 499 aaKnown RBP18.06■□□□□ 0.48
CLN6-215ENST00000636674 NUDT16Q96DE0 195 aaKnown RBP18.06■□□□□ 0.48
CLN6-215ENST00000636674 PLEKHM2Q8IWE5 1019 aa18.06■□□□□ 0.48
CLN6-215ENST00000636674 ELL2O00472 640 aaPredicted RBP18.05■□□□□ 0.48
CLN6-215ENST00000636674 ZRANB1Q9UGI0 708 aa18.05■□□□□ 0.48
CLN6-215ENST00000636674 NCKAP5LQ9HCH0 1330 aa18.05■□□□□ 0.48
CLN6-215ENST00000636674 ANKRD44Q8N8A2 993 aa18.05■□□□□ 0.48
CLN6-215ENST00000636674 CLCN1P35523 988 aa18.04■□□□□ 0.48
CLN6-215ENST00000636674 TTC22Q5TAA0 569 aa18.04■□□□□ 0.48
CLN6-215ENST00000636674 OVOS2A0A0J9YW53 1432 aa18.04■□□□□ 0.48
CLN6-215ENST00000636674 OVOS2Q6IE36 1432 aa18.04■□□□□ 0.48
CLN6-215ENST00000636674 RABEP1Q15276 862 aa18.03■□□□□ 0.48
CLN6-215ENST00000636674 RPAP2Q8IXW5 612 aaPredicted RBP18.03■□□□□ 0.48
CLN6-215ENST00000636674 SLIT1O75093 1534 aa18.03■□□□□ 0.48
CLN6-215ENST00000636674 FAM83GA6ND36 823 aa18.03■□□□□ 0.48
CLN6-215ENST00000636674 RRS1Q15050 365 aaKnown RBP18.03■□□□□ 0.48
CLN6-215ENST00000636674 IBTKQ9P2D0 1353 aaPredicted RBP18.02■□□□□ 0.48
CLN6-215ENST00000636674 ARHGAP23Q9P227 1491 aa18.02■□□□□ 0.48
CLN6-215ENST00000636674 PEAK1Q9H792 1746 aa18.02■□□□□ 0.48
CLN6-215ENST00000636674 PTPRCP08575 1304 aa18.02■□□□□ 0.48
CLN6-215ENST00000636674 CHL1O00533 1208 aa18.01■□□□□ 0.47
CLN6-215ENST00000636674 HSP90AA1P07900 732 aaKnown RBP18.01■□□□□ 0.47
CLN6-215ENST00000636674 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
CLN6-215ENST00000636674 ANKLE2Q86XL3 938 aa18■□□□□ 0.47
CLN6-215ENST00000636674 ARXQ96QS3 562 aa18■□□□□ 0.47
CLN6-215ENST00000636674 RTL1A6NKG5 1358 aa18■□□□□ 0.47
CLN6-215ENST00000636674 FMN2Q9NZ56 1722 aa18■□□□□ 0.47
CLN6-215ENST00000636674 RBM42Q9BTD8 480 aaKnown RBP17.99■□□□□ 0.47
CLN6-215ENST00000636674 PRR36Q9H6K5 1346 aa17.99■□□□□ 0.47
CLN6-215ENST00000636674 DCTN1Q14203 1278 aa17.99■□□□□ 0.47
CLN6-215ENST00000636674 EIF4A2Q14240 407 aaKnown RBP17.99■□□□□ 0.47
CLN6-215ENST00000636674 CEP85Q6P2H3 762 aa17.99■□□□□ 0.47
CLN6-215ENST00000636674 TXNDC2Q86VQ3 553 aa17.99■□□□□ 0.47
CLN6-215ENST00000636674 MSH6P52701 1360 aa17.99■□□□□ 0.47
CLN6-215ENST00000636674 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.98■□□□□ 0.47
CLN6-215ENST00000636674 CRB1P82279 1406 aa17.98■□□□□ 0.47
CLN6-215ENST00000636674 USP31Q70CQ4 1352 aa17.98■□□□□ 0.47
CLN6-215ENST00000636674 GOLGA6L22H0YM25 854 aa17.98■□□□□ 0.47
CLN6-215ENST00000636674 USP26Q9BXU7 913 aa17.98■□□□□ 0.47
CLN6-215ENST00000636674 NPHP4O75161 1426 aaPredicted RBP17.97■□□□□ 0.47
CLN6-215ENST00000636674 TMEM2Q9UHN6 1383 aa17.96■□□□□ 0.47
CLN6-215ENST00000636674 TUBGCP6Q96RT7 1819 aa17.96■□□□□ 0.47
CLN6-215ENST00000636674 SSFA2P28290 1259 aa17.96■□□□□ 0.47
CLN6-215ENST00000636674 HDGFP51858 240 aaKnown RBP17.96■□□□□ 0.47
CLN6-215ENST00000636674 TTC21BQ7Z4L5 1316 aa17.96■□□□□ 0.47
CLN6-215ENST00000636674 KLHL40Q2TBA0 621 aa17.96■□□□□ 0.47
CLN6-215ENST00000636674 GAS2L3Q86XJ1 694 aa17.96■□□□□ 0.47
CLN6-215ENST00000636674 AEBP1Q8IUX7 1158 aa17.96■□□□□ 0.47
CLN6-215ENST00000636674 USP6P35125 1406 aa17.95■□□□□ 0.46
CLN6-215ENST00000636674 ARHGEF10O15013 1369 aa17.95■□□□□ 0.46
CLN6-215ENST00000636674 CYP2E1P05181 493 aaPredicted RBP17.95■□□□□ 0.46
CLN6-215ENST00000636674 NUCB2P80303 420 aa17.95■□□□□ 0.46
CLN6-215ENST00000636674 SULT6B1Q6IMI4 303 aa17.95■□□□□ 0.46
CLN6-215ENST00000636674 N4BP2Q86UW6 1770 aaPredicted RBP17.95■□□□□ 0.46
CLN6-215ENST00000636674 BAG4O95429 457 aaKnown RBP17.94■□□□□ 0.46
CLN6-215ENST00000636674 LTBP4Q8N2S1 1624 aa17.94■□□□□ 0.46
CLN6-215ENST00000636674 CASC1Q6TDU7 716 aa17.94■□□□□ 0.46
CLN6-215ENST00000636674 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
CLN6-215ENST00000636674 ROBO2Q9HCK4 1378 aa17.94■□□□□ 0.46
CLN6-215ENST00000636674 PLEKHG3A1L390 1219 aa17.93■□□□□ 0.46
CLN6-215ENST00000636674 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
CLN6-215ENST00000636674 SSH2Q76I76 1423 aa17.93■□□□□ 0.46
CLN6-215ENST00000636674 ADAMTS13Q76LX8 1427 aa17.93■□□□□ 0.46
CLN6-215ENST00000636674 SDSP20132 328 aa17.93■□□□□ 0.46
CLN6-215ENST00000636674 OSBPL3Q9H4L5 887 aa17.93■□□□□ 0.46
CLN6-215ENST00000636674 AK9Q5TCS8 1911 aa17.92■□□□□ 0.46
CLN6-215ENST00000636674 C16orf71Q8IYS4 520 aaPredicted RBP17.92■□□□□ 0.46
CLN6-215ENST00000636674 CWC22Q9HCG8 908 aaKnown RBP17.92■□□□□ 0.46
CLN6-215ENST00000636674 FAM208AQ9UK61 1670 aaKnown RBP17.92■□□□□ 0.46
CLN6-215ENST00000636674 ESPNB1AK53 854 aa17.91■□□□□ 0.46
CLN6-215ENST00000636674 KRT24Q2M2I5 525 aa17.91■□□□□ 0.46
CLN6-215ENST00000636674 HMMRO75330 724 aa17.91■□□□□ 0.46
CLN6-215ENST00000636674 REC8O95072 547 aa17.91■□□□□ 0.46
CLN6-215ENST00000636674 LTKP29376 864 aa17.91■□□□□ 0.46
CLN6-215ENST00000636674 OTUD7AQ8TE49 926 aaPredicted RBP17.91■□□□□ 0.46
CLN6-215ENST00000636674 MEIS3Q99687 375 aa17.91■□□□□ 0.46
CLN6-215ENST00000636674 EID1Q9Y6B2 187 aa17.91■□□□□ 0.46
CLN6-215ENST00000636674 KDRP35968 1356 aa17.91■□□□□ 0.46
CLN6-215ENST00000636674 MCM10Q7L590 875 aa17.9■□□□□ 0.46
CLN6-215ENST00000636674 ST18O60284 1047 aa17.89■□□□□ 0.46
CLN6-215ENST00000636674 CACNA1FO60840 1977 aa17.89■□□□□ 0.45
CLN6-215ENST00000636674 ACEP12821 1306 aa17.89■□□□□ 0.45
CLN6-215ENST00000636674 ZNF445P59923 1031 aa17.89■□□□□ 0.45
CLN6-215ENST00000636674 PPP1R9BQ96SB3 815 aa17.89■□□□□ 0.45
CLN6-215ENST00000636674 XRN1Q8IZH2 1706 aaKnown RBP17.88■□□□□ 0.45
CLN6-215ENST00000636674 CCT4P50991 539 aaKnown RBP17.88■□□□□ 0.45
CLN6-215ENST00000636674 CCDC173Q0VFZ6 552 aa17.88■□□□□ 0.45
CLN6-215ENST00000636674 CERKQ8TCT0 537 aa17.88■□□□□ 0.45
CLN6-215ENST00000636674 ZNF335Q9H4Z2 1342 aaPredicted RBP17.88■□□□□ 0.45
CLN6-215ENST00000636674 DDX49Q9Y6V7 483 aaKnown RBP17.88■□□□□ 0.45
CLN6-215ENST00000636674 ERBB4Q15303 1308 aa17.87■□□□□ 0.45
CLN6-215ENST00000636674 PLEKHG1Q9ULL1 1385 aa17.87■□□□□ 0.45
CLN6-215ENST00000636674 ERC2O15083 957 aa17.87■□□□□ 0.45
CLN6-215ENST00000636674 TRIM44Q96DX7 344 aaPredicted RBP17.87■□□□□ 0.45
CLN6-215ENST00000636674 TTC21AQ8NDW8 1320 aa17.87■□□□□ 0.45
CLN6-215ENST00000636674 HSP90AB2PQ58FF8 381 aa17.86■□□□□ 0.45
CLN6-215ENST00000636674 SBNO1A3KN83 1393 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms